RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 ANXA6P08133 673 aa13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 HIST1H2AGP0C0S8 130 aaPredicted RBP13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 CDH1P12830 882 aa13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 HIST1H2ADP20671 130 aa13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 SOX9P48436 509 aa13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 ZNF284Q2VY69 593 aa13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 USP39Q53GS9 565 aaKnown RBP13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 CYBRD1Q53TN4 286 aa13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 NEK5Q6P3R8 708 aa13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 GCNT7Q6ZNI0 430 aa13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 TRAM1L1Q8N609 369 aa13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 HIST1H2AHQ96KK5 128 aa13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 RIPOR3Q96MK2 946 aa13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 CSF3RQ99062 836 aa13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 HIST1H2AJQ99878 128 aa13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 H2AFJQ9BTM1 129 aa13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 BDH2Q9BUT1 245 aa13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 TRMT61BQ9BVS5 477 aaKnown RBP13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 THAP10Q9P2Z0 257 aaPredicted RBP13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 PABPN1LA6NDY0 278 aaKnown RBP13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 ZNF701M0R085 212 aaPredicted RBP13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 IL6P05231 212 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 GSNP06396 782 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 TACR1P25103 407 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 ITPRIPL2Q3MIP1 535 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 PRR23BQ6ZRT6 265 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 MMAAQ8IVH4 418 aaKnown RBP13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 CHCHD4Q8N4Q1 142 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 ASB11Q8WXH4 323 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 ZSCAN5AQ9BUG6 496 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 SLC12A9Q9BXP2 914 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 ZNF576Q9H609 170 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 RAD18Q9NS91 495 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 NFKBIL1Q9UBC1 381 aaPredicted RBP13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 LIMD1Q9UGP4 676 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 UTS2RQ9UKP6 389 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 SPTBN5Q9NRC6 3674 aaKnown RBP13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 TMEM202A6NGA9 273 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 ADRB3P13945 408 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 EEF1B2P24534 225 aaKnown RBP13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 MAP4P27816 1152 aaKnown RBP13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 EIF2DP41214 584 aaKnown RBP13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 IST1P53990 364 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 PHC1P78364 1004 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 FAM98BQ52LJ0 330 aaKnown RBP13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 RIMKLAQ8IXN7 391 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 DHRSXQ8N5I4 330 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 ZNF548Q8NEK5 533 aaPredicted RBP13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 TNIP2Q8NFZ5 429 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 ELMO1Q92556 727 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 AP2M1Q96CW1 435 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 SLC29A3Q9BZD2 475 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 NTN4Q9HB63 628 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 FANCEQ9HB96 536 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 PRSS16Q9NQE7 514 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 INVSQ9Y283 1065 aa13.45□□□□□ -0.26
PTCHD3-201ENST00000438700 TICRRQ7Z2Z1 1910 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 WNT9AO14904 365 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 PRAMEF4O60810 478 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 SULT1C4O75897 302 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 RPS14P62263 151 aaKnown RBP13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 CHRNB3Q05901 458 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 NKG7Q16617 165 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 PRAMEF9Q5VWM5 478 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 ABRAXAS1Q6UWZ7 409 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 LRRC70Q7Z2Q7 622 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 C10orf111Q8N326 155 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 GLB1L3Q8NCI6 653 aaPredicted RBP13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 FOXJ1Q92949 421 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 NCLNQ969V3 563 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 TMBIM1Q969X1 311 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 PPP1R16AQ96I34 528 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 EGLN2Q96KS0 407 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 IFT80Q9P2H3 777 aaPredicted RBP13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 ADGRE2Q9UHX3 823 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 PCDHB14Q9Y5E9 798 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 DGKBQ9Y6T7 804 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 ATG2BQ96BY7 2078 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 CFAP99D6REC4 459 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 AXIN1O15169 862 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 NUAK1O60285 661 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 APODP05090 189 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 C8GP07360 202 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 RAP2AP10114 183 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 ZNF12P17014 697 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 HOXD12P35452 270 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 CAPGP40121 348 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 WASP42768 502 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 MTHFRP42898 656 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 PIGFQ07326 219 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 LAPTM5Q13571 262 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 MOGQ16653 247 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 PGS1Q32NB8 556 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 METTL2BQ6P1Q9 378 aaKnown RBP13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 PIWIL3Q7Z3Z3 882 aaKnown RBP13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 CACUL1Q86Y37 369 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 CHPT1Q8WUD6 406 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 SNX19Q92543 992 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 APIPQ96GX9 242 aa13.44□□□□□ -0.26
PTCHD3-201ENST00000438700 APOLD1Q96LR9 279 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms