RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 GON4LQ3T8J9 2241 aa11.03□□□□□ -0.64
SNHG3-202ENST00000437681 PRAMEF33A0A0G2JMD5 474 aa11.03□□□□□ -0.64
SNHG3-202ENST00000437681 AGPSO00116 658 aa11.03□□□□□ -0.64
SNHG3-202ENST00000437681 PRPF4O43172 522 aaKnown RBP eCLIP11.03□□□□□ -0.64
SNHG3-202ENST00000437681 HYAL3O43820 417 aaPredicted RBP11.03□□□□□ -0.64
SNHG3-202ENST00000437681 STK16O75716 305 aa11.03□□□□□ -0.64
SNHG3-202ENST00000437681 JMJD7P0C870 316 aa11.03□□□□□ -0.64
SNHG3-202ENST00000437681 GNGT1P63211 74 aa11.03□□□□□ -0.64
SNHG3-202ENST00000437681 REEP5Q00765 189 aa11.03□□□□□ -0.64
SNHG3-202ENST00000437681 ZNF844Q08AG5 666 aa11.03□□□□□ -0.64
SNHG3-202ENST00000437681 CDC16Q13042 620 aa11.03□□□□□ -0.64
SNHG3-202ENST00000437681 C16orf72Q14CZ0 275 aa11.03□□□□□ -0.64
SNHG3-202ENST00000437681 USP53Q70EK8 1073 aa11.03□□□□□ -0.64
SNHG3-202ENST00000437681 MED25Q71SY5 747 aa11.03□□□□□ -0.64
SNHG3-202ENST00000437681 THOC6Q86W42 341 aaKnown RBP11.03□□□□□ -0.64
SNHG3-202ENST00000437681 KCTD4Q8WVF5 259 aa11.03□□□□□ -0.64
SNHG3-202ENST00000437681 SLC5A11Q8WWX8 675 aa11.03□□□□□ -0.64
SNHG3-202ENST00000437681 ZNF501Q96CX3 271 aaPredicted RBP11.03□□□□□ -0.64
SNHG3-202ENST00000437681 VPS11Q9H270 941 aa11.03□□□□□ -0.64
SNHG3-202ENST00000437681 SPHK1Q9NYA1 384 aa11.03□□□□□ -0.64
SNHG3-202ENST00000437681 IGHV5-51A0A0C4DH38 117 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 SERTM1A2A2V5 107 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 EFCAB7A8K855 629 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 H3BMH7 237 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 K7EPI3 171 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 TM9SF1O15321 606 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 DLGAP3O95886 979 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 PIM1P11309 404 aaPredicted RBP11.02□□□□□ -0.65
SNHG3-202ENST00000437681 MTHFD2P13995 350 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 NPPBP16860 134 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 GNAZP19086 355 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 SAT1P21673 171 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 ATP5F1P24539 256 aaPredicted RBP11.02□□□□□ -0.65
SNHG3-202ENST00000437681 ITGA1P56199 1179 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 GABREP78334 506 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 ZNF460Q14592 562 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 SF1Q15637 639 aaKnown RBP11.02□□□□□ -0.65
SNHG3-202ENST00000437681 CCSMST1Q4G0I0 132 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 PAGE2BQ5JRK9 111 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 LIPJQ5W064 366 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 FCRL6Q6DN72 434 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 MFSD9Q8NBP5 474 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 NT5CQ8TCD5 201 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 SLC39A1Q9NY26 324 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 WWOXQ9NZC7 414 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 CD274Q9NZQ7 290 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 KLK13Q9UKR3 277 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 IKZF3Q9UKT9 509 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 ZFHX2Q9C0A1 2572 aaPredicted RBP11.02□□□□□ -0.65
SNHG3-202ENST00000437681 TAPBPO15533 448 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 RAB40ALP0C0E4 278 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 KRT15P19012 456 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 PWP1Q13610 501 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 NXPE4Q6UWF7 544 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 B3GNT8Q7Z7M8 397 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 PPP1R3BQ86XI6 285 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 ZNF761Q86XN6 746 aaPredicted RBP11.02□□□□□ -0.65
SNHG3-202ENST00000437681 KRT78Q8N1N4 520 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 TMEM151AQ8N4L1 468 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 BANPQ8N9N5 519 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 TTC29Q8NA56 475 aaPredicted RBP11.02□□□□□ -0.65
SNHG3-202ENST00000437681 SREK1Q8WXA9 508 aaKnown RBP11.02□□□□□ -0.65
SNHG3-202ENST00000437681 REPS1Q96D71 796 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 SPDL1Q96EA4 605 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 PTCD3Q96EY7 689 aaKnown RBP11.02□□□□□ -0.65
SNHG3-202ENST00000437681 EGFL8Q99944 293 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 ZFYVE21Q9BQ24 234 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 AIF1LQ9BQI0 150 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 XKR8Q9H6D3 395 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 ALG9Q9H6U8 611 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 TMEM9Q9P0T7 183 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 SATB2Q9UPW6 733 aa11.02□□□□□ -0.65
SNHG3-202ENST00000437681 PIEZO1Q92508 2521 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 PCM1Q15154 2024 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 GOLGA6L10A6NI86 522 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 SLC9B1P1A6NJY1 282 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 BOLA2-SMG1P6H3BVE0 249 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 RGS16O15492 202 aaPredicted RBP11.01□□□□□ -0.65
SNHG3-202ENST00000437681 FGF3P11487 239 aaPredicted RBP11.01□□□□□ -0.65
SNHG3-202ENST00000437681 HNF4AP41235 474 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 ATP1A2P50993 1020 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 SKP1P63208 163 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 GALNT1Q10472 559 aaPredicted RBP11.01□□□□□ -0.65
SNHG3-202ENST00000437681 NAE1Q13564 534 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 PDK4Q16654 411 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 KIAA1614Q5VZ46 1190 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 ZYG11AQ6WRX3 759 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 FAM92BQ6ZTR7 304 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 ESX1Q8N693 406 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 EPS8L3Q8TE67 593 aaKnown RBP11.01□□□□□ -0.65
SNHG3-202ENST00000437681 TM4SF19Q96DZ7 209 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 SMC6Q96SB8 1091 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 TMEM79Q9BSE2 394 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 TRMOQ9BU70 441 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 NTMT1Q9BV86 223 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 RHBGQ9H310 441 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 SLC6A20Q9NP91 592 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 COPEO14579 308 aa11.01□□□□□ -0.65
SNHG3-202ENST00000437681 POLR1CO15160 346 aaPredicted RBP11.01□□□□□ -0.65
SNHG3-202ENST00000437681 RPS17P08708 135 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms