RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 AHSGP02765 367 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 GP1BAP07359 652 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 ADRB1P08588 477 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 SPI1P17947 270 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 MGAT1P26572 445 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 CD6P30203 668 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 TIE1P35590 1138 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 EFNA5P52803 228 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 PTRHD1Q6GMV3 140 aaKnown RBP7.14□□□□□ -1.27
GARNL3-205ENST00000435213 LAMTOR1Q6IAA8 161 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 KCNT2Q6UVM3 1135 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 FAM183BPQ6ZVS7 135 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 OFCC1Q8IZS5 231 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 ZSCAN18Q8TBC5 510 aaPredicted RBP7.14□□□□□ -1.27
GARNL3-205ENST00000435213 ADAMTS14Q8WXS8 1223 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 NTAN1Q96AB6 310 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 TMEM176AQ96HP8 235 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 FBXL20Q96IG2 436 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 AGAP2Q99490 1192 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 SYT17Q9BSW7 474 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 TTLL2Q9BWV7 592 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 BBS2Q9BXC9 721 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 FAM117AQ9C073 453 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 TWSG1Q9GZX9 223 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 WDR55Q9H6Y2 383 aaPredicted RBP7.14□□□□□ -1.27
GARNL3-205ENST00000435213 KIF25Q9UIL4 384 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 CDH9Q9ULB4 789 aa7.14□□□□□ -1.27
GARNL3-205ENST00000435213 RPS10-NUDT3A0A1W2PQS6 291 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 TCP10L2B9ZVM9 353 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 DNASE2O00115 360 aaPredicted RBP7.13□□□□□ -1.27
GARNL3-205ENST00000435213 PIK3R2O00459 728 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 NEMP1O14524 444 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 PHYHO14832 338 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 SCAMP1O15126 338 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 PCDHGA12O60330 932 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 TBC1D4O60343 1298 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 CILPO75339 1184 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 ALPPP05187 535 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 C2P06681 752 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 H2AFB1P0C5Y9 115 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 H2AFB2P0C5Z0 115 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 NR2C1P13056 603 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 CD1EP15812 388 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 NDUFB7P17568 137 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 GGT5P36269 586 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 CCR9P51686 369 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 CAPSQ13938 189 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 CDO1Q16878 200 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 LIPMQ5VYY2 423 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 OR6B2Q6IFH4 312 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 LAYNQ6UX15 382 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 TRILQ7L0X0 811 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 NLGN4XQ8N0W4 816 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 PLD6Q8N2A8 252 aaKnown RBP7.13□□□□□ -1.27
GARNL3-205ENST00000435213 ZNF321PQ8N8H1 164 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 USP7Q93009 1102 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 ZNF669Q96BR6 464 aaPredicted RBP7.13□□□□□ -1.27
GARNL3-205ENST00000435213 CHFRQ96EP1 664 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 TREX2Q9BQ50 279 aaPredicted RBP7.13□□□□□ -1.27
GARNL3-205ENST00000435213 TBCDQ9BTW9 1192 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 MENTQ9BUN1 341 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 GLIS2Q9BZE0 524 aaPredicted RBP7.13□□□□□ -1.27
GARNL3-205ENST00000435213 ZCCHC4Q9H5U6 513 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 NMRAL1Q9HBL8 299 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 GPATCH2LQ9NWQ4 482 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 SDHAF2Q9NX18 166 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 TMEM181Q9P2C4 612 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 NUDT5Q9UKK9 219 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 SSR3Q9UNL2 185 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 KCNH4Q9UQ05 1017 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 MAB21L2Q9Y586 359 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 LCTP09848 1927 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 A0A096LPK6 155 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 SLC22A23A1A5C7 686 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 TCAF2A6NFQ2 919 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 CCDC154A6NI56 674 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 KPNA3O00505 521 aaPredicted RBP7.13□□□□□ -1.27
GARNL3-205ENST00000435213 GSTA4O15217 222 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 TPOP07202 933 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 SBK2P0C263 348 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 RAB3BP20337 219 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 MSX2P35548 267 aaPredicted RBP7.13□□□□□ -1.27
GARNL3-205ENST00000435213 ATXN3P54252 364 aaPredicted RBP7.13□□□□□ -1.27
GARNL3-205ENST00000435213 PSME3P61289 254 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 PTPRRQ15256 657 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 DPYSL2Q16555 572 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 TIGD6Q17RP2 521 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 RAB6CQ53S08 254 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 HECTD3Q5T447 861 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 CMC1Q7Z7K0 106 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 TNS4Q8IZW8 715 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 C8orf59Q8N0T1 100 aaPredicted RBP7.13□□□□□ -1.27
GARNL3-205ENST00000435213 HTR3CQ8WXA8 447 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 SLC25A36Q96CQ1 311 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 CCNL2Q96S94 520 aaPredicted RBP7.13□□□□□ -1.27
GARNL3-205ENST00000435213 GAD1Q99259 594 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 ELOVL4Q9GZR5 314 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 RAB6CQ9H0N0 254 aa7.13□□□□□ -1.27
GARNL3-205ENST00000435213 FAM124BQ9H5Z6 455 aaPredicted RBP7.13□□□□□ -1.27
GARNL3-205ENST00000435213 OPA3Q9H6K4 179 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms