RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 LINGO1Q96FE5 620 aa21.1■□□□□ 0.97
SEMA3B-205ENST00000434030 PRAP1Q96NZ9 151 aa21.1■□□□□ 0.97
SEMA3B-205ENST00000434030 CCDC177Q9NQR7 707 aaPredicted RBP21.1■□□□□ 0.97
SEMA3B-205ENST00000434030 CDC23Q9UJX2 597 aa21.1■□□□□ 0.97
SEMA3B-205ENST00000434030 NXT1Q9UKK6 140 aaKnown RBP21.1■□□□□ 0.97
SEMA3B-205ENST00000434030 CORO1CQ9ULV4 474 aaPredicted RBP21.1■□□□□ 0.97
SEMA3B-205ENST00000434030 PLAAQ9Y263 795 aa21.1■□□□□ 0.97
SEMA3B-205ENST00000434030 SHANK1Q9Y566 2161 aa21.1■□□□□ 0.97
SEMA3B-205ENST00000434030 E7ESA3 106 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 SOCS6O14544 535 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 HAT1O14929 419 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 DPM1O60762 260 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 TSPAN12O95859 305 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 FDXRP22570 491 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 SOX8P57073 446 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 IL2P60568 153 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 TBPL1P62380 186 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 PDAP1Q13442 181 aaKnown RBP21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 FASTKD3Q14CZ7 662 aaKnown RBP21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 PHKG1Q16816 387 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 PRAMEF13Q5VWM6 474 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 AGTRAPQ6RW13 159 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 HPS6Q86YV9 775 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 PLD3Q8IV08 490 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 FBXO36Q8NEA4 188 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 STT3BQ8TCJ2 826 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 RERGQ96A58 199 aaPredicted RBP21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 MIB2Q96AX9 1013 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 OLFM1Q99784 485 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 ATG10Q9H0Y0 220 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 ATP13A2Q9NQ11 1180 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 TMEM184CQ9NVA4 438 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 ZNF282Q9UDV7 671 aaPredicted RBP21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 HS3ST3B1Q9Y662 390 aa21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.09■□□□□ 0.97
SEMA3B-205ENST00000434030 TTLL8A6PVC2 850 aa21.08■□□□□ 0.97
SEMA3B-205ENST00000434030 HRH2P25021 359 aa21.08■□□□□ 0.97
SEMA3B-205ENST00000434030 OCA2Q04671 838 aa21.08■□□□□ 0.97
SEMA3B-205ENST00000434030 CBLBQ13191 982 aa21.08■□□□□ 0.97
SEMA3B-205ENST00000434030 MYBPC3Q14896 1274 aa21.08■□□□□ 0.97
SEMA3B-205ENST00000434030 VWA5B1Q5TIE3 1220 aa21.08■□□□□ 0.97
SEMA3B-205ENST00000434030 GARNL3Q5VVW2 1013 aa21.08■□□□□ 0.97
SEMA3B-205ENST00000434030 FAM45BPQ6NSW5 357 aa21.08■□□□□ 0.97
SEMA3B-205ENST00000434030 KIRREL2Q6UWL6 708 aa21.08■□□□□ 0.97
SEMA3B-205ENST00000434030 ARHGEF39Q8N4T4 335 aa21.08■□□□□ 0.97
SEMA3B-205ENST00000434030 RBMXL3Q8N7X1 1067 aaKnown RBP21.08■□□□□ 0.97
SEMA3B-205ENST00000434030 SPATA4Q8NEY3 305 aa21.08■□□□□ 0.97
SEMA3B-205ENST00000434030 FAM45AQ8TCE6 357 aa21.08■□□□□ 0.97
SEMA3B-205ENST00000434030 MVB12AQ96EY5 273 aa21.08■□□□□ 0.97
SEMA3B-205ENST00000434030 PCBD2Q9H0N5 130 aa21.08■□□□□ 0.97
SEMA3B-205ENST00000434030 ZNF552Q9H707 407 aaPredicted RBP21.08■□□□□ 0.97
SEMA3B-205ENST00000434030 SEMA3GQ9NS98 782 aa21.08■□□□□ 0.97
SEMA3B-205ENST00000434030 MOCS1Q9NZB8 636 aa21.08■□□□□ 0.97
SEMA3B-205ENST00000434030 C5AR2Q9P296 337 aa21.08■□□□□ 0.97
SEMA3B-205ENST00000434030 CDC14AQ9UNH5 594 aa21.08■□□□□ 0.97
SEMA3B-205ENST00000434030 SCN2AQ99250 2005 aa21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 IGLV3-12A0A075B6K2 115 aa21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 TXNDC9O14530 226 aa21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 HIST1H2AGP0C0S8 130 aaPredicted RBP21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 ZGLP1P0C6A0 271 aa21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 HIST1H2ADP20671 130 aa21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 FBLP22087 321 aaKnown RBP21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 KLC1Q07866 573 aa21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 MGAT5Q09328 741 aa21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 AIMP2Q13155 320 aaKnown RBP21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 NAE1Q13564 534 aa21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 VWA2Q5GFL6 755 aa21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 JMJD6Q6NYC1 403 aaPredicted RBP21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 C17orf53Q8N3J3 647 aaPredicted RBP21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 BBOF1Q8ND07 529 aa21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 MIEF2Q96C03 454 aa21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 HIST1H2AHQ96KK5 128 aa21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 HIST1H2AJQ99878 128 aa21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 H2AFJQ9BTM1 129 aa21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 MFRPQ9BY79 579 aa21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 ZFATQ9P243 1243 aa21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 FBXL4Q9UKA2 621 aa21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 SH2B3Q9UQQ2 575 aa21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 PSAT1Q9Y617 370 aa21.07■□□□□ 0.96
SEMA3B-205ENST00000434030 FAM187AA6NFU0 413 aa21.06■□□□□ 0.96
SEMA3B-205ENST00000434030 NDC80O14777 642 aa21.06■□□□□ 0.96
SEMA3B-205ENST00000434030 P2RX6O15547 441 aa21.06■□□□□ 0.96
SEMA3B-205ENST00000434030 FOXS1O43638 330 aa21.06■□□□□ 0.96
SEMA3B-205ENST00000434030 SORBS2O94875 1100 aaKnown RBP21.06■□□□□ 0.96
SEMA3B-205ENST00000434030 CD97P48960 835 aa21.06■□□□□ 0.96
SEMA3B-205ENST00000434030 ZXDCQ2QGD7 858 aaPredicted RBP21.06■□□□□ 0.96
SEMA3B-205ENST00000434030 PRSS58Q8IYP2 241 aa21.06■□□□□ 0.96
SEMA3B-205ENST00000434030 ALKBH8Q96BT7 664 aaKnown RBP21.06■□□□□ 0.96
SEMA3B-205ENST00000434030 ERP44Q9BS26 406 aa21.06■□□□□ 0.96
SEMA3B-205ENST00000434030 CRB3Q9BUF7 120 aa21.06■□□□□ 0.96
SEMA3B-205ENST00000434030 SGPP1Q9BX95 441 aa21.06■□□□□ 0.96
SEMA3B-205ENST00000434030 KLHL41O60662 606 aa21.05■□□□□ 0.96
SEMA3B-205ENST00000434030 ALOX12BO75342 701 aa21.05■□□□□ 0.96
SEMA3B-205ENST00000434030 CCND1P24385 295 aa21.05■□□□□ 0.96
SEMA3B-205ENST00000434030 CASQ1P31415 396 aa21.05■□□□□ 0.96
SEMA3B-205ENST00000434030 SLC26A3P40879 764 aa21.05■□□□□ 0.96
SEMA3B-205ENST00000434030 CSNK1G2P78368 415 aa21.05■□□□□ 0.96
SEMA3B-205ENST00000434030 DSG2Q14126 1118 aa21.05■□□□□ 0.96
SEMA3B-205ENST00000434030 RBBP7Q16576 425 aa21.05■□□□□ 0.96
SEMA3B-205ENST00000434030 LCTLQ6UWM7 567 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms