RNA–Protein interactions for RNA: ENST00000428222.1

AC004835.1-201, humanhuman

TSL 5 BASIC

Gene AC004835.1, Length 2,907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004835.1-201ENST00000428222 NTMT1Q9BV86 223 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 KLHL25Q9H0H3 589 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 RERGLQ9H628 205 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 RLIMQ9NVW2 624 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 KCTD5Q9NXV2 234 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 PAIP2BQ9ULR5 123 aaKnown RBP16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 CAB39Q9Y376 341 aaPredicted RBP16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 SH3BP1Q9Y3L3 701 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 TRBV5-3A0A0A0MS03 114 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 A0A1W2PRU2 124 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 TRIM43BA6NCK2 446 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 MAGEB17A8MXT2 336 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 AOAHP28039 575 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 SERPINA4P29622 427 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 KDELR2P33947 212 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 GZMMP51124 257 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 EPS8Q12929 822 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 ATG9BQ674R7 924 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 Q6ZVL8 140 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 AADATQ8N5Z0 425 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 C1orf52Q8N6N3 182 aaKnown RBP16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 ALG14Q96F25 216 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 SAMD11Q96NU1 681 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 CDK5RAP1Q96SZ6 601 aaKnown RBP16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 HTATIP2Q9BUP3 242 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 REEP1Q9H902 201 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 TRPS1Q9UHF7 1281 aa16.42■□□□□ 0.22
AC004835.1-201ENST00000428222 PLXNA3P51805 1871 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 LINC00854A0A1B0GVQ3 168 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 FAM220BPB1ANY3 271 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 KCNK5O95279 499 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 POU1F1P28069 291 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 NSG1P42857 185 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 AP1S1P61966 158 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 GANABQ14697 944 aaKnown RBP16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 INO80DQ53TQ3 878 aaPredicted RBP16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 RBM12BQ8IXT5 1001 aaKnown RBP16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 NELL1Q92832 810 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 DNASE1L2Q92874 299 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 ZNF347Q96SE7 839 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 HMG20AQ9NP66 347 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 B4GALT6Q9UBX8 382 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 J3KTA2 159 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 RGS10O43665 173 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 RETP07949 1114 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 HOXA9P31269 272 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 NRIP1P48552 1158 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 MC1RQ01726 317 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 ACSM2AQ08AH3 577 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 TUBA3CQ13748 450 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 VMACQ2NL98 169 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 ACSM2BQ68CK6 577 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 SLC22A16Q86VW1 577 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 P3H2Q8IVL5 708 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 DACH2Q96NX9 599 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 NRTNQ99748 197 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 ASPSCR1Q9BZE9 553 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 RAD18Q9NS91 495 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 TBCCD1Q9NVR7 557 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 TMPRSS11EQ9UL52 423 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 FZD4Q9ULV1 537 aa16.41■□□□□ 0.22
AC004835.1-201ENST00000428222 TBX1O43435 398 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 PCDH7O60245 1069 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 ZNF821O75541 412 aaPredicted RBP16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 IGSF6O95976 241 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 SLC10A3P09131 477 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 AMD1P17707 334 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 GTF2E2P29084 291 aaKnown RBP16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 MRPL19P49406 292 aaKnown RBP16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 ST13P50502 369 aaKnown RBP16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 ABHD18Q0P651 414 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 ELAVL2Q12926 359 aaKnown RBP16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 SLC8B1Q6J4K2 584 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 SHQ1Q6PI26 577 aaKnown RBP16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 CADM3Q8N126 398 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 DCAF4L2Q8NA75 395 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 ZHX1-C8orf76Q96EF9 292 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 BRD9Q9H8M2 597 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 TPT1P8Q9HAU6 139 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 TRIM39Q9HCM9 518 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 FAM227AF5H4B4 570 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 ETV3P41162 512 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 TMED10P49755 219 aaKnown RBP16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 CBX2Q14781 532 aaPredicted RBP16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 INAVAQ3KP66 663 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 CALHM3Q86XJ0 350 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 ZZZ3Q8IYH5 903 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 NAGSQ8N159 534 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 OR2AP1Q8NGE2 309 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 GTPBP3Q969Y2 492 aaKnown RBP16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 TRIT1Q9H3H1 467 aaKnown RBP16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 WDR70Q9NW82 654 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 SAMD4AQ9UPU9 718 aaKnown RBP16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 CCL26Q9Y258 94 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 TPRKBQ9Y3C4 175 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 SNX8Q9Y5X2 465 aa16.4■□□□□ 0.22
AC004835.1-201ENST00000428222 RPLP2P05387 115 aaKnown RBP16.39■□□□□ 0.21
AC004835.1-201ENST00000428222 LIPAP38571 399 aa16.39■□□□□ 0.21
AC004835.1-201ENST00000428222 RPS3AP61247 264 aaKnown RBP16.39■□□□□ 0.21
AC004835.1-201ENST00000428222 GAB1Q13480 694 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms