RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 RPL7AP62424 266 aaKnown RBP4.94□□□□□ -1.62
LINC00458-202ENST00000427299 DYNLT1P63172 113 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 ROR2Q01974 943 aaKnown RBP4.94□□□□□ -1.62
LINC00458-202ENST00000427299 CNTN2Q02246 1040 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 SLC18A2Q05940 514 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 SLC34A1Q06495 639 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 GALNT2Q10471 571 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 AP1B1Q10567 949 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 WASHC5Q12768 1159 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 TBL3Q12788 808 aaKnown RBP4.94□□□□□ -1.62
LINC00458-202ENST00000427299 CAPSQ13938 189 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 KCNJ11Q14654 390 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 SLC1A5Q15758 541 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 STXBP2Q15833 593 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 PRICKLE4Q2TBC4 344 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 PTPN20Q4JDL3 420 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 STXBP5Q5T5C0 1151 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 SPOPLQ6IQ16 392 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 AAGABQ6PD74 315 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 SLC30A9Q6PML9 568 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 SCARA5Q6ZMJ2 495 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 SEPT14Q6ZU15 432 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 C3orf62Q6ZUJ4 267 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 SDCCAG8Q86SQ7 713 aaPredicted RBP4.94□□□□□ -1.62
LINC00458-202ENST00000427299 LRRC6Q86X45 466 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 ST13P4Q8IZP2 240 aaPredicted RBP4.94□□□□□ -1.62
LINC00458-202ENST00000427299 NKAIN3Q8N8D7 197 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 KCTD6Q8NC69 237 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 MCUQ8NE86 351 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 OR52N4Q8NGI2 321 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 GSDMBQ8TAX9 411 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 SPATA18Q8TC71 538 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 CREB3L4Q8TEY5 395 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 PPP4R1Q8TF05 950 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 ZFAND2BQ8WV99 257 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 FAF2Q96CS3 445 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 RNF125Q96EQ8 232 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 RNFT2Q96EX2 444 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 ZBED3Q96IU2 234 aaPredicted RBP4.94□□□□□ -1.62
LINC00458-202ENST00000427299 ZNF333Q96JL9 665 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 ZNF347Q96SE7 839 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 CLSTN3Q9BQT9 956 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 ADPGKQ9BRR6 497 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 WDR83Q9BRX9 315 aaKnown RBP4.94□□□□□ -1.62
LINC00458-202ENST00000427299 FUZQ9BT04 418 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 CNPY3Q9BT09 278 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 NAT9Q9BTE0 207 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 NFKBIZQ9BYH8 718 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 RSPH9Q9H1X1 276 aaPredicted RBP4.94□□□□□ -1.62
LINC00458-202ENST00000427299 C1orf21Q9H246 121 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 Q9H521 79 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 KIF9Q9HAQ2 790 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 APOBEC3GQ9HC16 384 aaKnown RBP4.94□□□□□ -1.62
LINC00458-202ENST00000427299 VCX3AQ9NNX9 186 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 MYOZ2Q9NPC6 264 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 SLCO1B3Q9NPD5 702 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 PLSCR4Q9NRQ2 329 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 PRMT7Q9NVM4 692 aaPredicted RBP4.94□□□□□ -1.62
LINC00458-202ENST00000427299 NMRK1Q9NWW6 199 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 KLQ9UEF7 1012 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 HSF4Q9ULV5 492 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 DTX4Q9Y2E6 619 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 LRRC42Q9Y546 428 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 GBF1Q92538 1859 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 SF3B1O75533 1304 aaKnown RBP eCLIP4.94□□□□□ -1.62
LINC00458-202ENST00000427299 PTPRJQ12913 1337 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 SCN1AP35498 2009 aa4.94□□□□□ -1.62
LINC00458-202ENST00000427299 A0A087WYN8 130 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 FAM170AA1A519 330 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 HACD1B0YJ81 288 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 MCIDASD6RGH6 385 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 GOLGA8SH3BPF8 625 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 H7C0C1 242 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 ATP9AO75110 1047 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 SMIM24O75264 130 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 PTP4A3O75365 173 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 GAS8-AS1O95177 125 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 KLHL2O95198 593 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 IGKV3-20P01619 116 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 APOEP02649 317 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 MYL2P10916 166 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 CHRNB1P11230 501 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 HOXB9P17482 250 aaPredicted RBP4.93□□□□□ -1.62
LINC00458-202ENST00000427299 UBA1P22314 1058 aaKnown RBP4.93□□□□□ -1.62
LINC00458-202ENST00000427299 PRKCHP24723 683 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 ACAT1P24752 427 aaKnown RBP4.93□□□□□ -1.62
LINC00458-202ENST00000427299 SSTR1P30872 391 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 PGM1P36871 562 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 FDFT1P37268 417 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 PEX19P40855 299 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 ATP5OP48047 213 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 NR2C2P49116 596 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 CDH6P55285 790 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 GPX6P59796 221 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 YWHAZP63104 245 aaKnown RBP4.93□□□□□ -1.62
LINC00458-202ENST00000427299 GRIK3Q13003 919 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 ALKBH1Q13686 389 aaKnown RBP4.93□□□□□ -1.62
LINC00458-202ENST00000427299 BAATQ14032 418 aaPredicted RBP4.93□□□□□ -1.62
LINC00458-202ENST00000427299 RCN2Q14257 317 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 EFTUD2Q15029 972 aaKnown RBP eCLIP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms