RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 CDKN2AIPNLQ96HQ2 116 aa13.4□□□□□ -0.26
HDAC6-206ENST00000426196 PPP1R2P1Q96PQ5 205 aa13.4□□□□□ -0.26
HDAC6-206ENST00000426196 ALS2CR12Q96Q35 445 aa13.4□□□□□ -0.26
HDAC6-206ENST00000426196 OLFM1Q99784 485 aa13.4□□□□□ -0.26
HDAC6-206ENST00000426196 TSSK1BQ9BXA7 367 aa13.4□□□□□ -0.26
HDAC6-206ENST00000426196 DRC3Q9H069 523 aa13.4□□□□□ -0.26
HDAC6-206ENST00000426196 NAT10Q9H0A0 1025 aaKnown RBP13.4□□□□□ -0.26
HDAC6-206ENST00000426196 RUVBL1Q9Y265 456 aaKnown RBP13.4□□□□□ -0.26
HDAC6-206ENST00000426196 PLEKHA6Q9Y2H5 1048 aa13.4□□□□□ -0.26
HDAC6-206ENST00000426196 IGHV3-20A0A0C4DH32 117 aa13.39□□□□□ -0.27
HDAC6-206ENST00000426196 H0YGG7 62 aa13.39□□□□□ -0.27
HDAC6-206ENST00000426196 H7C0C1 242 aa13.39□□□□□ -0.27
HDAC6-206ENST00000426196 TFECO14948 347 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-206ENST00000426196 CTAG2O75638 210 aa13.39□□□□□ -0.27
HDAC6-206ENST00000426196 CYC1P08574 325 aa13.39□□□□□ -0.27
HDAC6-206ENST00000426196 MSNP26038 577 aaKnown RBP13.39□□□□□ -0.27
HDAC6-206ENST00000426196 ATP5OP48047 213 aa13.39□□□□□ -0.27
HDAC6-206ENST00000426196 ST13P50502 369 aaKnown RBP13.39□□□□□ -0.27
HDAC6-206ENST00000426196 ARF3P61204 181 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-206ENST00000426196 ZBED6P86452 979 aa13.39□□□□□ -0.27
HDAC6-206ENST00000426196 EXT1Q16394 746 aa13.39□□□□□ -0.27
HDAC6-206ENST00000426196 MFSD4BQ5TF39 518 aa13.39□□□□□ -0.27
HDAC6-206ENST00000426196 GARNL3Q5VVW2 1013 aa13.39□□□□□ -0.27
HDAC6-206ENST00000426196 VRK3Q8IV63 474 aa13.39□□□□□ -0.27
HDAC6-206ENST00000426196 CSNK1A1LQ8N752 337 aa13.39□□□□□ -0.27
HDAC6-206ENST00000426196 SLC35G2Q8TBE7 412 aa13.39□□□□□ -0.27
HDAC6-206ENST00000426196 STYXQ8WUJ0 223 aa13.39□□□□□ -0.27
HDAC6-206ENST00000426196 ASZ1Q8WWH4 475 aa13.39□□□□□ -0.27
HDAC6-206ENST00000426196 NAP1L5Q96NT1 182 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-206ENST00000426196 MDFIQ99750 246 aa13.39□□□□□ -0.27
HDAC6-206ENST00000426196 VN1R1Q9GZP7 353 aa13.39□□□□□ -0.27
HDAC6-206ENST00000426196 TP63Q9H3D4 680 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-206ENST00000426196 ARNT2Q9HBZ2 717 aa13.39□□□□□ -0.27
HDAC6-206ENST00000426196 LRFN1Q9P244 771 aa13.39□□□□□ -0.27
HDAC6-206ENST00000426196 ATRQ13535 2644 aa13.39□□□□□ -0.27
HDAC6-206ENST00000426196 A0A1B0GTH9 108 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 OR2A25A4D2G3 310 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 KLK8O60259 260 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 PHF2O75151 1096 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 SLC25A12O75746 678 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 NEURL1O76050 574 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 STK10O94804 968 aaKnown RBP13.38□□□□□ -0.27
HDAC6-206ENST00000426196 APOA4P06727 396 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 TMEM253P0C7T8 217 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 RBL1P28749 1068 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 CMPK1P30085 196 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 ADSLP30566 484 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-206ENST00000426196 SLC1A1P43005 524 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 EFNA3P52797 238 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 TAS2R50P59544 299 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 TYRO3Q06418 890 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 SYT16Q17RD7 645 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 HKDC1Q2TB90 917 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 MINDY4Q4G0A6 757 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 RNFT1Q5M7Z0 435 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 DENND5AQ6IQ26 1287 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 LANCL3Q6ZV70 420 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 CCDC71Q8IV32 467 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-206ENST00000426196 CPSF7Q8N684 471 aaKnown RBP13.38□□□□□ -0.27
HDAC6-206ENST00000426196 POGLUT1Q8NBL1 392 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 GSDMBQ8TAX9 411 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 M1APQ8TC57 530 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 RAD51AP1Q96B01 352 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 SEC16BQ96JE7 1060 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 CYTH2Q99418 400 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 TTC1Q99614 292 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 DPH7Q9BTV6 452 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 CLEC4MQ9H2X3 399 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-206ENST00000426196 LIME1Q9H400 295 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 ZNF358Q9NW07 568 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 MRFAP1Q9Y605 127 aa13.38□□□□□ -0.27
HDAC6-206ENST00000426196 SCN3AQ9NY46 2000 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 MPDZO75970 2070 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 A0A0A6YYC8 382 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-206ENST00000426196 SMTNL1A8MU46 457 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 I3L1I5 382 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-206ENST00000426196 PROM1O43490 865 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 SPOPO43791 374 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 NME2P1O60361 137 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 PRMT3O60678 531 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 NME2P22392 152 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 CCR7P32248 378 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 AGTR2P50052 363 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 MAT1AQ00266 395 aaKnown RBP13.37□□□□□ -0.27
HDAC6-206ENST00000426196 SPARCL1Q14515 664 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 TMED2Q15363 201 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 SLC18A3Q16572 532 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 ANKRD20A2Q5SQ80 823 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 ANKRD20A1Q5TYW2 823 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 ANKRD20A3Q5VUR7 823 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 LRRC8BQ6P9F7 803 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 ACAD11Q709F0 780 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 CAMKMTQ7Z624 323 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 CCDC50Q8IVM0 306 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 LGI4Q8N135 537 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 OR2A1Q8NGT9 310 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 HMGCLL1Q8TB92 370 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 RERGQ96A58 199 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-206ENST00000426196 TMEM125Q96AQ2 219 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 C18orf12Q96KH6 178 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms