RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 GTF3C1Q12789 2109 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 ITPR3Q14573 2671 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 SYCE3A1L190 88 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 APOA4P06727 396 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 C8orf89P0DMQ9 161 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 ABOP16442 354 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 CTNNA2P26232 953 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 GRIA1P42261 906 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 EMP3P54852 163 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 TPM4P67936 248 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 OR1C1Q15619 314 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 LONRF1Q17RB8 773 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 TSTD2Q5T7W7 516 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 PRSS41Q7RTY9 318 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 GALNTL5Q7Z4T8 443 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.8□□□□□ -0.36
VEGFB-202ENST00000426086 PAQR7Q86WK9 346 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 MARVELD2Q8N4S9 558 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 PHF10Q8WUB8 498 aaKnown RBP12.8□□□□□ -0.36
VEGFB-202ENST00000426086 MVB12AQ96EY5 273 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 OR2A5Q96R48 311 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 FERMT1Q9BQL6 677 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 PLCD4Q9BRC7 762 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 RAB11FIP5Q9BXF6 653 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 ZNHIT6Q9NWK9 470 aaKnown RBP12.8□□□□□ -0.36
VEGFB-202ENST00000426086 CDC14AQ9UNH5 594 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 PCDHGB6Q9Y5F9 930 aa12.8□□□□□ -0.36
VEGFB-202ENST00000426086 HCFC1P51610 2035 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 E9PLN8 166 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 MFAP3LO75121 409 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 ICAM2P13598 275 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 CD99P14209 185 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 EEF1DP29692 281 aaKnown RBP12.79□□□□□ -0.36
VEGFB-202ENST00000426086 CTNNA1P35221 906 aaKnown RBP12.79□□□□□ -0.36
VEGFB-202ENST00000426086 COPS2P61201 443 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 ACVR1Q04771 509 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 ZNF468Q5VIY5 522 aaPredicted RBP12.79□□□□□ -0.36
VEGFB-202ENST00000426086 PLAG1Q6DJT9 500 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 C11orf63Q6NUN7 778 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 AFTPHQ6ULP2 937 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 CPEB2Q7Z5Q1 589 aaKnown RBP12.79□□□□□ -0.36
VEGFB-202ENST00000426086 PLD3Q8IV08 490 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 DNAAF3Q8N9W5 541 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 OR4L1Q8NH43 312 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 CA5BP1Q8WTZ4 195 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 ALG3Q92685 438 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 PPP1R2P1Q96PQ5 205 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 ALS2CR12Q96Q35 445 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 CYTH2Q99418 400 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 VKORC1Q9BQB6 163 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 UCK2Q9BZX2 261 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 PPT2Q9UMR5 302 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 EFR3BQ9Y2G0 817 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 PCDHA3Q9Y5H8 950 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 MTORP42345 2549 aa12.79□□□□□ -0.36
VEGFB-202ENST00000426086 NKX2-6A6NCS4 301 aa12.78□□□□□ -0.36
VEGFB-202ENST00000426086 PRPF4O43172 522 aaKnown RBP eCLIP12.78□□□□□ -0.367e-7■■■■■ 43.1
VEGFB-202ENST00000426086 NEURL1O76050 574 aa12.78□□□□□ -0.36
VEGFB-202ENST00000426086 ANXA5P08758 320 aa12.78□□□□□ -0.36
VEGFB-202ENST00000426086 MYBL2P10244 700 aa12.78□□□□□ -0.36
VEGFB-202ENST00000426086 CMPK1P30085 196 aa12.78□□□□□ -0.36
VEGFB-202ENST00000426086 DNAJA1P31689 397 aaKnown RBP12.78□□□□□ -0.36
VEGFB-202ENST00000426086 PTGER1P34995 402 aa12.78□□□□□ -0.36
VEGFB-202ENST00000426086 PTPN7P35236 360 aa12.78□□□□□ -0.36
VEGFB-202ENST00000426086 IST1P53990 364 aa12.78□□□□□ -0.36
VEGFB-202ENST00000426086 TFF3Q07654 80 aa12.78□□□□□ -0.36
VEGFB-202ENST00000426086 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.78□□□□□ -0.36
VEGFB-202ENST00000426086 ZNF425Q6IV72 752 aa12.78□□□□□ -0.36
VEGFB-202ENST00000426086 ZNF227Q86WZ6 799 aa12.78□□□□□ -0.36
VEGFB-202ENST00000426086 RPRMLQ8N4K4 120 aa12.78□□□□□ -0.36
VEGFB-202ENST00000426086 OR9A4Q8NGU2 314 aa12.78□□□□□ -0.36
VEGFB-202ENST00000426086 OR6P1Q8NGX9 317 aa12.78□□□□□ -0.36
VEGFB-202ENST00000426086 ZNF354BQ96LW1 612 aa12.78□□□□□ -0.36
VEGFB-202ENST00000426086 ANP32EQ9BTT0 268 aa12.78□□□□□ -0.36
VEGFB-202ENST00000426086 DRC3Q9H069 523 aa12.78□□□□□ -0.36
VEGFB-202ENST00000426086 P2RY12Q9H244 342 aa12.78□□□□□ -0.36
VEGFB-202ENST00000426086 GSX1Q9H4S2 264 aaPredicted RBP12.78□□□□□ -0.36
VEGFB-202ENST00000426086 KCNK13Q9HB14 408 aa12.78□□□□□ -0.36
VEGFB-202ENST00000426086 MRPS30Q9NP92 439 aaKnown RBP12.78□□□□□ -0.36
VEGFB-202ENST00000426086 TEKT2Q9UIF3 430 aa12.78□□□□□ -0.36
VEGFB-202ENST00000426086 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.78□□□□□ -0.36
VEGFB-202ENST00000426086 PRRC2AP48634 2157 aaKnown RBP12.78□□□□□ -0.36
VEGFB-202ENST00000426086 HEATR5BQ9P2D3 2071 aa12.77□□□□□ -0.36
VEGFB-202ENST00000426086 GABRR3A8MPY1 467 aa12.77□□□□□ -0.37
VEGFB-202ENST00000426086 GOLGA6L19H0YKK7 550 aa12.77□□□□□ -0.37
VEGFB-202ENST00000426086 FANCGO15287 622 aa12.77□□□□□ -0.37
VEGFB-202ENST00000426086 SP1P08047 785 aa12.77□□□□□ -0.37
VEGFB-202ENST00000426086 ERGP11308 486 aa12.77□□□□□ -0.37
VEGFB-202ENST00000426086 MAGEA1P43355 309 aa12.77□□□□□ -0.37
VEGFB-202ENST00000426086 NR0B1P51843 470 aaKnown RBP12.77□□□□□ -0.37
VEGFB-202ENST00000426086 FASTKD1Q53R41 847 aaKnown RBP12.77□□□□□ -0.37
VEGFB-202ENST00000426086 GARNL3Q5VVW2 1013 aa12.77□□□□□ -0.37
VEGFB-202ENST00000426086 TTC23LQ6PF05 361 aa12.77□□□□□ -0.37
VEGFB-202ENST00000426086 CEP128Q6ZU80 1094 aa12.77□□□□□ -0.37
VEGFB-202ENST00000426086 ANKRD37Q7Z713 158 aa12.77□□□□□ -0.37
VEGFB-202ENST00000426086 GHDCQ8N2G8 530 aa12.77□□□□□ -0.37
VEGFB-202ENST00000426086 CPSF7Q8N684 471 aaKnown RBP12.77□□□□□ -0.37
VEGFB-202ENST00000426086 PPFIBP2Q8ND30 876 aa12.77□□□□□ -0.37
VEGFB-202ENST00000426086 SKA2Q8WVK7 121 aaPredicted RBP12.77□□□□□ -0.37
VEGFB-202ENST00000426086 MACROD1Q9BQ69 325 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms