RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 AOAHP28039 575 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 TTKP33981 857 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 CBSP35520 551 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 NNMTP40261 264 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 CLDN8P56748 225 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 GTF2H3Q13889 308 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 TTC23Q5W5X9 447 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 XKR5Q6UX68 686 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 LRRC70Q7Z2Q7 622 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 GALNT5Q7Z7M9 940 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 CACUL1Q86Y37 369 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 ADHFE1Q8IWW8 467 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 ELMO1Q92556 727 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 CCDC138Q96M89 665 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 RBM4BQ9BQ04 359 aaKnown RBP10.34□□□□□ -0.75
CUX1-205ENST00000425244 FAM83CQ9BQN1 747 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 RBM4Q9BWF3 364 aaKnown RBP10.34□□□□□ -0.75
CUX1-205ENST00000425244 OSBPL10Q9BXB5 764 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 YTHDF1Q9BYJ9 559 aaKnown RBP10.34□□□□□ -0.75
CUX1-205ENST00000425244 S1PR5Q9H228 398 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 SERHLQ9NQF3 203 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 DCAF13Q9NV06 445 aaKnown RBP10.34□□□□□ -0.75
CUX1-205ENST00000425244 WARS2Q9UGM6 360 aaKnown RBP10.34□□□□□ -0.75
CUX1-205ENST00000425244 NUP210Q8TEM1 1887 aaPredicted RBP10.34□□□□□ -0.75
CUX1-205ENST00000425244 KIF26AQ9ULI4 1882 aaPredicted RBP10.34□□□□□ -0.75
CUX1-205ENST00000425244 A0A096LPI6 279 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 A0A1W2PQ67 120 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 OR2AG2A6NM03 316 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 PTGES3LE9PB15 166 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 MAGEB3O15480 346 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 HPRP00739 348 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 AGXTP21549 392 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 RECQLP46063 649 aaPredicted RBP10.34□□□□□ -0.75
CUX1-205ENST00000425244 BNIP3Q12983 259 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 SF1Q15637 639 aaKnown RBP10.34□□□□□ -0.75
CUX1-205ENST00000425244 SMU1Q2TAY7 513 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 KLHL35Q6PF15 583 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 CYP2U1Q7Z449 544 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 PNPT1Q8TCS8 783 aaKnown RBP10.34□□□□□ -0.75
CUX1-205ENST00000425244 RIPOR3Q96MK2 946 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 SLC12A9Q9BXP2 914 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 DGCR6LQ9BY27 220 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 CCDC90BQ9GZT6 254 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 KCNH6Q9H252 994 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 TMPRSS11EQ9UL52 423 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 ERVW-1Q9UQF0 538 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 TRBV5-3A0A0A0MS03 114 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 MYO1GB0I1T2 1018 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 FAM220BPB1ANY3 271 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 ZNF701M0R085 212 aaPredicted RBP10.33□□□□□ -0.76
CUX1-205ENST00000425244 SOX1O00570 391 aaPredicted RBP10.33□□□□□ -0.76
CUX1-205ENST00000425244 MITFO75030 526 aaPredicted RBP10.33□□□□□ -0.76
CUX1-205ENST00000425244 CYP4B1P13584 511 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 NR4A1P22736 598 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 CRHBPP24387 322 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 DCTP40126 519 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 PPP2R2BQ00005 443 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 CHIT1Q13231 466 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 SLC14A1Q13336 389 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 RUNX3Q13761 415 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 CTU2Q2VPK5 515 aaKnown RBP10.33□□□□□ -0.76
CUX1-205ENST00000425244 FRG2Q64ET8 278 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 ATG9BQ674R7 924 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 ANKRD26P1Q6NSI1 321 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 ZCCHC8Q6NZY4 707 aaKnown RBP10.33□□□□□ -0.76
CUX1-205ENST00000425244 SVOPLQ8N434 492 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 OR7A2PQ8NGA2 310 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 ZNF420Q8TAQ5 688 aaPredicted RBP10.33□□□□□ -0.76
CUX1-205ENST00000425244 ASB11Q8WXH4 323 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 FRG2BQ96QU4 278 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 LYSMD1Q96S90 227 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 MTERF1Q99551 399 aaKnown RBP10.33□□□□□ -0.76
CUX1-205ENST00000425244 DNAJC11Q9NVH1 559 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 ASIC5Q9NY37 505 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 HS3ST2Q9Y278 367 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 AGAP14A8MT82 685 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 PRAMEF4O60810 478 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 DIRAS1O95057 198 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 CPSF4O95639 269 aaKnown RBP10.33□□□□□ -0.76
CUX1-205ENST00000425244 C8GP07360 202 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 PRPS2P11908 318 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 ATP1B2P14415 290 aaPredicted RBP10.33□□□□□ -0.76
CUX1-205ENST00000425244 ZNF182P17025 639 aaPredicted RBP10.33□□□□□ -0.76
CUX1-205ENST00000425244 CYP2A7P20853 494 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 KIR3DL1P43629 444 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 SPINT3P49223 89 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 CD47Q08722 323 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 ABRQ12979 859 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 CARD16Q5EG05 197 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 PRAMEF9Q5VWM5 478 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 METTL2BQ6P1Q9 378 aaKnown RBP10.33□□□□□ -0.76
CUX1-205ENST00000425244 METTL3Q86U44 580 aaKnown RBP10.33□□□□□ -0.76
CUX1-205ENST00000425244 SYT12Q8IV01 421 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 ZCCHC7Q8N3Z6 543 aaKnown RBP10.33□□□□□ -0.76
CUX1-205ENST00000425244 CHDHQ8NE62 594 aaPredicted RBP10.33□□□□□ -0.76
CUX1-205ENST00000425244 OR13F1Q8NGS4 319 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 MCOLN3Q8TDD5 553 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 SNX19Q92543 992 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 FOXJ1Q92949 421 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 CHFRQ96EP1 664 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms