RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 NDUFA2O43678 99 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 NBNO60934 754 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 SEC22BO75396 215 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 GLP2RO95838 553 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 ITGAMP11215 1152 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 POU1F1P28069 291 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 RPS5P46782 204 aaKnown RBP10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 GEMP55040 296 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 CCL23P55773 120 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 ELP6Q0PNE2 266 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 BTN1A1Q13410 526 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 GRIK4Q16099 956 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 DOK6Q6PKX4 331 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 OR4F6Q8NGB9 312 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 SETD6Q8TBK2 473 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 TSPEARQ8WU66 669 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 DIRAS2Q96HU8 199 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 TSSK3Q96PN8 268 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 MGLLQ99685 303 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 DUSP16Q9BY84 665 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 RNF121Q9H920 327 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 ZIM2Q9NZV7 527 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 ALG5Q9Y673 324 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 DNAH14Q0VDD8 3507 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 CDH23Q9H251 3354 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 LOC102723532A0A0G2JNH3 316 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 E9PAM4 449 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 KCNJ13O60928 360 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 PSIP1O75475 530 aaKnown RBP10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 CNMDO75829 334 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 PRLP01236 227 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 OPN1SWP03999 348 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 FDXRP22570 491 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 GPC1P35052 558 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 OR1E2P47887 323 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 GZMKP49863 264 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 DSTNP60981 165 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 MGAT3Q09327 533 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 SETMARQ53H47 684 aaPredicted RBP10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 SIRPB2Q5JXA9 342 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 BCDIN3DQ7Z5W3 292 aaKnown RBP10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 SNX20Q7Z614 316 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 TAC4Q86UU9 113 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 PLCZ1Q86YW0 608 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 DPP10Q8N608 796 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 OR10Z1Q8NGY1 313 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 FAM83DQ9H4H8 585 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 ZNF556Q9HAH1 456 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 CLEC2DQ9UHP7 191 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 SNX7Q9UNH6 387 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 AP3M1Q9Y2T2 418 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 AUP1Q9Y679 476 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 NINQ8N4C6 2090 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 IGKV6-21A0A0C4DH24 114 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 A0A0G2JLL6 359 aaPredicted RBP10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 MYBPHLA2RUH7 354 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 SOWAHBA6NEL2 793 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 SH3BGRLO75368 114 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 SYPP08247 313 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 CSF3P09919 207 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 AKT1P31749 480 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 DSC3Q14574 896 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 GRM7Q14831 915 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 PAN2Q504Q3 1202 aaKnown RBP10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 PDZK1Q5T2W1 519 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 XKRXQ6PP77 449 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 SUSD1Q6UWL2 747 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 METTL7BQ6UX53 244 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 ANKS3Q6ZW76 656 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 PRRT2Q7Z6L0 340 aaPredicted RBP10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 MAL2Q969L2 176 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 DPY30Q9C005 99 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 PSORS1C1Q9UIG5 152 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 ATPIF1Q9UII2 106 aa10.95□□□□□ -0.66
SEC61A1-202ENST00000424880 GLTPD2A6NH11 291 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 NT5C1B-RDH14C9J2C7 533 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 MRPS14O60783 128 aaKnown RBP10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 TSPAN19P0C672 248 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 HAPLN1P10915 354 aaPredicted RBP10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 APEX1P27695 318 aaKnown RBP10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 TALDO1P37837 337 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 FEN1P39748 380 aaKnown RBP10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 NFKB2Q00653 900 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 KIAA1324Q6UXG2 1013 aaKnown RBP10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 B3GNT7Q8NFL0 401 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 WDR36Q8NI36 951 aaKnown RBP10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 SCAMP5Q8TAC9 235 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 MTERF3Q96E29 417 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 SIPA1Q96FS4 1042 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 IL4I1Q96RQ9 567 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 FAM129BQ96TA1 746 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 FEVQ99581 238 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 TM9SF2Q99805 663 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 TRAF4Q9BUZ4 470 aaPredicted RBP10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 CCDC32Q9BV29 185 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 SPATC1LQ9H0A9 340 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 PRM3Q9NNZ6 103 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 BPIFA1Q9NP55 256 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms