RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 HIST1H2AHQ96KK5 128 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 C10orf90Q96M02 699 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 OLFM1Q99784 485 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 HIST1H2AJQ99878 128 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 H2AFJQ9BTM1 129 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 NUDT9Q9BW91 350 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 DPH5Q9H2P9 285 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 SYNPO2LQ9H987 977 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 TMEM184CQ9NVA4 438 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 CDC14AQ9UNH5 594 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 RUVBL1Q9Y265 456 aaKnown RBP15.71■□□□□ 0.11
LINC00404-201ENST00000418660 MAU2Q9Y6X3 613 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 H7BY64 318 aa15.7■□□□□ 0.1
LINC00404-201ENST00000418660 RAD51CO43502 376 aa15.7■□□□□ 0.1
LINC00404-201ENST00000418660 CCND1P24385 295 aa15.7■□□□□ 0.1
LINC00404-201ENST00000418660 PHKG1Q16816 387 aa15.7■□□□□ 0.1
LINC00404-201ENST00000418660 COLEC12Q5KU26 742 aa15.7■□□□□ 0.1
LINC00404-201ENST00000418660 GARNL3Q5VVW2 1013 aa15.7■□□□□ 0.1
LINC00404-201ENST00000418660 SYT10Q6XYQ8 523 aa15.7■□□□□ 0.1
LINC00404-201ENST00000418660 STRA8Q7Z7C7 330 aa15.7■□□□□ 0.1
LINC00404-201ENST00000418660 SLC26A11Q86WA9 606 aa15.7■□□□□ 0.1
LINC00404-201ENST00000418660 ZBED8Q8IZ13 594 aa15.7■□□□□ 0.1
LINC00404-201ENST00000418660 MVB12AQ96EY5 273 aa15.7■□□□□ 0.1
LINC00404-201ENST00000418660 PRAP1Q96NZ9 151 aa15.7■□□□□ 0.1
LINC00404-201ENST00000418660 SMAD5Q99717 465 aaKnown RBP15.7■□□□□ 0.1
LINC00404-201ENST00000418660 TRIM54Q9BYV2 358 aa15.7■□□□□ 0.1
LINC00404-201ENST00000418660 NSMCE4AQ9NXX6 385 aa15.7■□□□□ 0.1
LINC00404-201ENST00000418660 GPR83Q9NYM4 423 aa15.7■□□□□ 0.1
LINC00404-201ENST00000418660 CTSFQ9UBX1 484 aa15.7■□□□□ 0.1
LINC00404-201ENST00000418660 PSAT1Q9Y617 370 aa15.7■□□□□ 0.1
LINC00404-201ENST00000418660 PABPN1LA6NDY0 278 aaKnown RBP15.69■□□□□ 0.1
LINC00404-201ENST00000418660 AGPSO00116 658 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 HAT1O14929 419 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 EIF3HO15372 352 aaKnown RBP eCLIP15.69■□□□□ 0.1
LINC00404-201ENST00000418660 PRPF4O43172 522 aaKnown RBP eCLIP15.69■□□□□ 0.1
LINC00404-201ENST00000418660 KLHL41O60662 606 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 FBLP22087 321 aaKnown RBP15.69■□□□□ 0.1
LINC00404-201ENST00000418660 PGGT1BP53609 377 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 AP1S2P56377 157 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 SOX8P57073 446 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 FOXK1P85037 733 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 OCA2Q04671 838 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 C2orf54Q08AI8 447 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 NAE1Q13564 534 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 HKDC1Q2TB90 917 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 DUPD1Q68J44 220 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 MBOAT1Q6ZNC8 495 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 ZC3HC1Q86WB0 502 aaKnown RBP15.69■□□□□ 0.1
LINC00404-201ENST00000418660 PLD3Q8IV08 490 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 STT3BQ8TCJ2 826 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 PYROXD1Q8WU10 500 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 SGPP1Q9BX95 441 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 ATG10Q9H0Y0 220 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 SOX17Q9H6I2 414 aaPredicted RBP15.69■□□□□ 0.1
LINC00404-201ENST00000418660 ATP13A2Q9NQ11 1180 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 SEMA3GQ9NS98 782 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 ARL15Q9NXU5 204 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 C5AR2Q9P296 337 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 ZNF282Q9UDV7 671 aaPredicted RBP15.69■□□□□ 0.1
LINC00404-201ENST00000418660 CDC23Q9UJX2 597 aa15.69■□□□□ 0.1
LINC00404-201ENST00000418660 BSNQ9UPA5 3926 aa15.68■□□□□ 0.1
LINC00404-201ENST00000418660 IGLV3-12A0A075B6K2 115 aa15.68■□□□□ 0.1
LINC00404-201ENST00000418660 KCNE1BA0A087WTH5 132 aa15.68■□□□□ 0.1
LINC00404-201ENST00000418660 FAM95CA0A1B0GW59 222 aa15.68■□□□□ 0.1
LINC00404-201ENST00000418660 DPM1O60762 260 aa15.68■□□□□ 0.1
LINC00404-201ENST00000418660 ENO2P09104 434 aaPredicted RBP15.68■□□□□ 0.1
LINC00404-201ENST00000418660 RPS15AP62244 130 aaKnown RBP15.68■□□□□ 0.1
LINC00404-201ENST00000418660 CSNK1G2P78368 415 aa15.68■□□□□ 0.1
LINC00404-201ENST00000418660 ILF2Q12905 390 aaKnown RBP15.68■□□□□ 0.1
LINC00404-201ENST00000418660 DSG2Q14126 1118 aa15.68■□□□□ 0.1
LINC00404-201ENST00000418660 MYBPC3Q14896 1274 aa15.68■□□□□ 0.1
LINC00404-201ENST00000418660 CAPN13Q6MZZ7 669 aaPredicted RBP15.68■□□□□ 0.1
LINC00404-201ENST00000418660 LCTLQ6UWM7 567 aa15.68■□□□□ 0.1
LINC00404-201ENST00000418660 SHISA6Q6ZSJ9 500 aa15.68■□□□□ 0.1
LINC00404-201ENST00000418660 C17orf64Q86WR6 236 aa15.68■□□□□ 0.1
LINC00404-201ENST00000418660 GALNT16Q8N428 558 aa15.68■□□□□ 0.1
LINC00404-201ENST00000418660 ARHGEF39Q8N4T4 335 aa15.68■□□□□ 0.1
LINC00404-201ENST00000418660 MIEF2Q96C03 454 aa15.68■□□□□ 0.1
LINC00404-201ENST00000418660 THAP11Q96EK4 314 aa15.68■□□□□ 0.1
LINC00404-201ENST00000418660 GRHL1Q9NZI5 618 aa15.68■□□□□ 0.1
LINC00404-201ENST00000418660 HS3ST3B1Q9Y662 390 aa15.68■□□□□ 0.1
LINC00404-201ENST00000418660 PCM1Q15154 2024 aa15.68■□□□□ 0.1
LINC00404-201ENST00000418660 SOCS6O14544 535 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 P2RX6O15547 441 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 ZGLP1P0C6A0 271 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 NPPBP16860 134 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 ZNF37AP17032 561 aaPredicted RBP15.67■□□□□ 0.1
LINC00404-201ENST00000418660 SAT1P21673 171 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 SLC26A3P40879 764 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 AIMP2Q13155 320 aaKnown RBP15.67■□□□□ 0.1
LINC00404-201ENST00000418660 RAPSNQ13702 412 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 FAM53BQ14153 422 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 IGFBP7Q16270 282 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 RBBP7Q16576 425 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 NDUFA9Q16795 377 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 ZXDCQ2QGD7 858 aaPredicted RBP15.67■□□□□ 0.1
LINC00404-201ENST00000418660 NADK2Q4G0N4 442 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 VWA5B1Q5TIE3 1220 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 KIRREL2Q6UWL6 708 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 TMEM207Q6UWW9 146 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms