RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 GPN2Q9H9Y4 310 aaPredicted RBP11.52□□□□□ -0.56
LIMK1-202ENST00000418310 DNAJC11Q9NVH1 559 aa11.52□□□□□ -0.56
LIMK1-202ENST00000418310 KIAA1522Q9P206 1035 aaPredicted RBP11.52□□□□□ -0.56
LIMK1-202ENST00000418310 LSM7Q9UK45 103 aaKnown RBP11.52□□□□□ -0.56
LIMK1-202ENST00000418310 SAMD4AQ9UPU9 718 aaKnown RBP11.52□□□□□ -0.56
LIMK1-202ENST00000418310 A8MU76 341 aa11.52□□□□□ -0.57
LIMK1-202ENST00000418310 ZNF821O75541 412 aaPredicted RBP11.52□□□□□ -0.57
LIMK1-202ENST00000418310 SRCP12931 536 aa11.52□□□□□ -0.57
LIMK1-202ENST00000418310 CD9P21926 228 aa11.52□□□□□ -0.57
LIMK1-202ENST00000418310 PTPN6P29350 595 aa11.52□□□□□ -0.57
LIMK1-202ENST00000418310 RRM2P31350 389 aa11.52□□□□□ -0.57
LIMK1-202ENST00000418310 SMARCB1Q12824 385 aa11.52□□□□□ -0.57
LIMK1-202ENST00000418310 CATSPEREQ5SY80 951 aa11.52□□□□□ -0.57
LIMK1-202ENST00000418310 P3H2Q8IVL5 708 aa11.52□□□□□ -0.57
LIMK1-202ENST00000418310 MRPL9Q9BYD2 267 aaKnown RBP11.52□□□□□ -0.57
LIMK1-202ENST00000418310 ZBTB20Q9HC78 741 aaPredicted RBP11.52□□□□□ -0.57
LIMK1-202ENST00000418310 KRBA1A5PL33 1030 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 GRXCR2A6NFK2 248 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 NEDD8-MDP1E9PL57 170 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 BMP4P12644 408 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 CD36P16671 472 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 ZNF12P17014 697 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 CD6P30203 668 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 ETV3P41162 512 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 GZMMP51124 257 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 EPHB3P54753 998 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 TP53BP2Q13625 1128 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 CDKN3Q16667 212 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 ZNF852Q6ZMS4 543 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 USP45Q70EL2 814 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 NLGN4XQ8N0W4 816 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 CACTIN-AS1Q8N1I8 211 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 C2orf15Q8WU43 125 aaKnown RBP11.51□□□□□ -0.57
LIMK1-202ENST00000418310 CYB5D2Q8WUJ1 264 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 ITFG2Q969R8 447 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 SUV39H2Q9H5I1 410 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 TPT1P8Q9HAU6 139 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 TAS2R16Q9NYV7 291 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 USE1Q9NZ43 259 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 TMPRSS11EQ9UL52 423 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 FZD4Q9ULV1 537 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 CCL26Q9Y258 94 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 XIRP2A4UGR9 3374 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 RGS10O43665 173 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 PCDHGA12O60330 932 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 CCNDBP1O95273 360 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 KCNK5O95279 499 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 HLA-FP30511 346 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 RPP38P78345 283 aaKnown RBP11.51□□□□□ -0.57
LIMK1-202ENST00000418310 TUBA3CQ13748 450 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 SHQ1Q6PI26 577 aaKnown RBP11.51□□□□□ -0.57
LIMK1-202ENST00000418310 TPRG1Q6ZUI0 275 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 GAREM2Q75VX8 874 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 CALHM3Q86XJ0 350 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 CCDC71Q8IV32 467 aaPredicted RBP11.51□□□□□ -0.57
LIMK1-202ENST00000418310 SAMD11Q96NU1 681 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 NEURL2Q9BR09 285 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 HMG20AQ9NP66 347 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 MRPL17Q9NRX2 175 aaKnown RBP11.51□□□□□ -0.57
LIMK1-202ENST00000418310 TMEM184CQ9NVA4 438 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 RHCGQ9UBD6 479 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 TPRKBQ9Y3C4 175 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 DNAH14Q0VDD8 3507 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 USP34Q70CQ2 3546 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.51□□□□□ -0.57
LIMK1-202ENST00000418310 WNT9AO14904 365 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 UGT2B11O75310 529 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 C1SP09871 688 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 HOXA9P31269 272 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 ST13P50502 369 aaKnown RBP11.51□□□□□ -0.57
LIMK1-202ENST00000418310 MTA1Q13330 715 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 SYTL3Q4VX76 610 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 PRSS36Q5K4E3 855 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 ZZZ3Q8IYH5 903 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 DNASE1L2Q92874 299 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 HPS1Q92902 700 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 ALPK1Q96QP1 1244 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 SGK2Q9HBY8 427 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 IL1RAPQ9NPH3 570 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 INIPQ9NRY2 104 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 INSL5Q9Y5Q6 135 aa11.51□□□□□ -0.57
LIMK1-202ENST00000418310 TRBV5-4A0A0C4DH59 114 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 SULT1C4O75897 302 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 PRPS2P11908 318 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 POU1F1P28069 291 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 SNRPD1P62314 119 aaKnown RBP11.5□□□□□ -0.57
LIMK1-202ENST00000418310 MC1RQ01726 317 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 GAB1Q13480 694 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 DOC2AQ14183 400 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 GANABQ14697 944 aaKnown RBP11.5□□□□□ -0.57
LIMK1-202ENST00000418310 CBX2Q14781 532 aaPredicted RBP11.5□□□□□ -0.57
LIMK1-202ENST00000418310 ZNF846Q147U1 533 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 STARD3Q14849 445 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 DUOXA1Q1HG43 343 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 COLEC12Q5KU26 742 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 TMPRSS11BQ86T26 416 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 PTOV1Q86YD1 416 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 RNF168Q8IYW5 571 aaPredicted RBP11.5□□□□□ -0.57
LIMK1-202ENST00000418310 CLIP4Q8N3C7 705 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 CHPT1Q8WUD6 406 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms