RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 GPSM3Q9Y4H4 160 aa16.2■□□□□ 0.18
SSBP3-205ENST00000417664 HS3ST3A1Q9Y663 406 aa16.2■□□□□ 0.18
SSBP3-205ENST00000417664 CHURC1-FNTBB4DL54 471 aa16.19■□□□□ 0.18
SSBP3-205ENST00000417664 HTR1EP28566 365 aa16.19■□□□□ 0.18
SSBP3-205ENST00000417664 DDX39BQ13838 428 aaKnown RBP16.19■□□□□ 0.18
SSBP3-205ENST00000417664 SKIV2LQ15477 1246 aaKnown RBP16.19■□□□□ 0.18
SSBP3-205ENST00000417664 MLF2Q15773 248 aaPredicted RBP16.19■□□□□ 0.18
SSBP3-205ENST00000417664 FXNQ16595 210 aa16.19■□□□□ 0.18
SSBP3-205ENST00000417664 LCN8Q6JVE9 175 aa16.19■□□□□ 0.18
SSBP3-205ENST00000417664 WASH2PQ6VEQ5 465 aa16.19■□□□□ 0.18
SSBP3-205ENST00000417664 FAM129CQ86XR2 697 aa16.19■□□□□ 0.18
SSBP3-205ENST00000417664 SYT12Q8IV01 421 aa16.19■□□□□ 0.18
SSBP3-205ENST00000417664 KRTCAP2Q8N6L1 136 aa16.19■□□□□ 0.18
SSBP3-205ENST00000417664 ABHD11Q8NFV4 315 aa16.19■□□□□ 0.18
SSBP3-205ENST00000417664 DNAJC9Q8WXX5 260 aa16.19■□□□□ 0.18
SSBP3-205ENST00000417664 WDR92Q96MX6 357 aa16.19■□□□□ 0.18
SSBP3-205ENST00000417664 TSSK3Q96PN8 268 aa16.19■□□□□ 0.18
SSBP3-205ENST00000417664 FERD3LQ96RJ6 166 aa16.19■□□□□ 0.18
SSBP3-205ENST00000417664 INSM2Q96T92 566 aaPredicted RBP16.19■□□□□ 0.18
SSBP3-205ENST00000417664 EFHD1Q9BUP0 239 aa16.19■□□□□ 0.18
SSBP3-205ENST00000417664 WASH6PQ9NQA3 447 aa16.19■□□□□ 0.18
SSBP3-205ENST00000417664 MOSPD1Q9UJG1 213 aa16.19■□□□□ 0.18
SSBP3-205ENST00000417664 WDR37Q9Y2I8 494 aa16.19■□□□□ 0.18
SSBP3-205ENST00000417664 MYO10Q9HD67 2058 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 PRSS51A0A1B0GVH4 220 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 POM121BA6NF01 834 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 SEMA4FO95754 770 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 NUDT1P36639 197 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 GSK3BP49841 420 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 RAB28P51157 221 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 CCR5P51681 352 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 LIPEQ05469 1076 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 MTAPQ13126 283 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 TMIGD1Q6UXZ0 262 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 SYT13Q7L8C5 426 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 GPR180Q86V85 440 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 HLA-CQ95604 372 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 SH3KBP1Q96B97 665 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 ITCHQ96J02 903 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 IL17FQ96PD4 163 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 KCTD14Q9BQ13 255 aaPredicted RBP16.18■□□□□ 0.18
SSBP3-205ENST00000417664 AIF1LQ9BQI0 150 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 KCNH6Q9H252 994 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 NT5DC2Q9H857 520 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 FGF22Q9HCT0 170 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 DMRT3Q9NQL9 472 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 SLAMF8Q9P0V8 285 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 KCNK6Q9Y257 313 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 CFAP20Q9Y6A4 193 aaKnown RBP16.18■□□□□ 0.18
SSBP3-205ENST00000417664 PEX1O43933 1283 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 ACADSP16219 412 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 TACR1P25103 407 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 NDUFS1P28331 727 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 SLC7A1P30825 629 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 RPS13P62277 151 aaKnown RBP16.18■□□□□ 0.18
SSBP3-205ENST00000417664 PRKCQQ04759 706 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 LRRC32Q14392 662 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 TAF11Q15544 211 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 RABL3Q5HYI8 236 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 LRIF1Q5T3J3 769 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 RNF111Q6ZNA4 994 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 PROSER1Q86XN7 944 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 TNIP2Q8NFZ5 429 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 OR8J2Q8NGG1 315 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 HMGB4Q8WW32 186 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 CXorf40BQ96DE9 158 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 BMFQ96LC9 184 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 CAMK1GQ96NX5 476 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 CARS2Q9HA77 564 aaKnown RBP16.18■□□□□ 0.18
SSBP3-205ENST00000417664 PLAGL1Q9UM63 463 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 NDRG2Q9UN36 371 aaKnown RBP16.18■□□□□ 0.18
SSBP3-205ENST00000417664 AP4S1Q9Y587 144 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 SNX13Q9Y5W8 968 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 COLEC10Q9Y6Z7 277 aa16.18■□□□□ 0.18
SSBP3-205ENST00000417664 A0A096LPI6 279 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 PDZK1P1A8MUH7 402 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 CHRNB1P11230 501 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 CDH1P12830 882 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 PTX3P26022 381 aaPredicted RBP16.17■□□□□ 0.18
SSBP3-205ENST00000417664 OXTRP30559 389 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 KIR3DL1P43629 444 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 CCR8P51685 355 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 LRRC74AQ0VAA2 488 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 KRT33BQ14525 404 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 LEXMQ3ZCV2 418 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 ENPP7Q6UWV6 458 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 ABRAXAS1Q6UWZ7 409 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 RNF175Q8N4F7 328 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 CATSPER1Q8NEC5 780 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 OR2L8Q8NGY9 312 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 CLHC1Q8NHS4 586 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 PRPF18Q99633 342 aaKnown RBP16.17■□□□□ 0.18
SSBP3-205ENST00000417664 ZNF184Q99676 751 aaPredicted RBP16.17■□□□□ 0.18
SSBP3-205ENST00000417664 MYOCQ99972 504 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 RHBGQ9H310 441 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 IMP3Q9NV31 184 aaKnown RBP16.17■□□□□ 0.18
SSBP3-205ENST00000417664 FAM120CQ9NX05 1096 aaKnown RBP16.17■□□□□ 0.18
SSBP3-205ENST00000417664 TAC3Q9UHF0 121 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 PCOLCE2Q9UKZ9 415 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 DUSP12Q9UNI6 340 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms