RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 SEMA6CQ9H3T2 930 aa12.77□□□□□ -0.37
CNN3-203ENST00000415017 EML4Q9HC35 981 aaKnown RBP12.77□□□□□ -0.37
CNN3-203ENST00000415017 MRPS30Q9NP92 439 aaKnown RBP12.77□□□□□ -0.37
CNN3-203ENST00000415017 SLCO1B3Q9NPD5 702 aa12.77□□□□□ -0.37
CNN3-203ENST00000415017 GEMIN8Q9NWZ8 242 aaKnown RBP12.77□□□□□ -0.37
CNN3-203ENST00000415017 ZDHHC2Q9UIJ5 367 aa12.77□□□□□ -0.37
CNN3-203ENST00000415017 ADAM21Q9UKJ8 722 aa12.77□□□□□ -0.37
CNN3-203ENST00000415017 ZNF490Q9ULM2 529 aaPredicted RBP12.77□□□□□ -0.37
CNN3-203ENST00000415017 PPT2Q9UMR5 302 aa12.77□□□□□ -0.37
CNN3-203ENST00000415017 SNX7Q9UNH6 387 aa12.77□□□□□ -0.37
CNN3-203ENST00000415017 RNF11Q9Y3C5 154 aa12.77□□□□□ -0.37
CNN3-203ENST00000415017 DYRK1BQ9Y463 629 aa12.77□□□□□ -0.37
CNN3-203ENST00000415017 PTPRZ1P23471 2315 aaPredicted RBP12.77□□□□□ -0.37
CNN3-203ENST00000415017 ZNF195O14628 629 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 CLGNO14967 610 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 EDF1O60869 148 aaKnown RBP12.76□□□□□ -0.37
CNN3-203ENST00000415017 OR4F21O95013 312 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 ENO1P06733 434 aaKnown RBP12.76□□□□□ -0.37
CNN3-203ENST00000415017 MSL3P1P0C860 447 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 CDH1P12830 882 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 HOXB3P14651 431 aaPredicted RBP12.76□□□□□ -0.37
CNN3-203ENST00000415017 VARSP26640 1264 aaKnown RBP12.76□□□□□ -0.37
CNN3-203ENST00000415017 CCR8P51685 355 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 CCNG1P51959 295 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 FOXA1P55317 472 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 ZNF33BQ06732 778 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 BIRC2Q13490 618 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 LAPTM5Q13571 262 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 ZIC1Q15915 447 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 THEMIS2Q5TEJ8 643 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 CDCP2Q5VXM1 449 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 FBXO42Q6P3S6 717 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 GPRIN3Q6ZVF9 776 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 MILR1Q7Z6M3 343 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 SLITRK4Q8IW52 837 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 KIRREL3Q8IZU9 778 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 ZNF781Q8N8C0 355 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 Q8N9G6 341 aaPredicted RBP12.76□□□□□ -0.37
CNN3-203ENST00000415017 SNX31Q8N9S9 440 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 PPP1R14CQ8TAE6 165 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 SEC16BQ96JE7 1060 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 SLC41A2Q96JW4 573 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 NUDT22Q9BRQ3 303 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 DPH7Q9BTV6 452 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 SLC29A3Q9BZD2 475 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 RHBGQ9H310 441 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 SYNPO2LQ9H987 977 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 MID1IP1Q9NPA3 183 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 PSD3Q9NYI0 1048 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 TMEM9Q9P0T7 183 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 BTRCQ9Y297 605 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 ANGPTL3Q9Y5C1 460 aa12.76□□□□□ -0.37
CNN3-203ENST00000415017 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.75□□□□□ -0.37
CNN3-203ENST00000415017 TRBC2A0A5B9 178 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 GSAPA4D1B5 854 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 CNOT1A5YKK6 2376 aaKnown RBP12.75□□□□□ -0.37
CNN3-203ENST00000415017 TCP11X1B4DZS4 312 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 NPIPB8E9PQR5 432 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 H7BY64 318 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 SLC30A4O14863 429 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 POLR3GO15318 223 aaPredicted RBP12.75□□□□□ -0.37
CNN3-203ENST00000415017 KIF1CO43896 1103 aaKnown RBP12.75□□□□□ -0.37
CNN3-203ENST00000415017 TGDSO95455 350 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 TBX6O95947 436 aaPredicted RBP12.75□□□□□ -0.37
CNN3-203ENST00000415017 RPLP0P05388 317 aaKnown RBP12.75□□□□□ -0.37
CNN3-203ENST00000415017 UROSP10746 265 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 THRAP10827 490 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 ST6GAL1P15907 406 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 ALOX15P16050 662 aaPredicted RBP12.75□□□□□ -0.37
CNN3-203ENST00000415017 MAGP20916 626 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 PTPRBP23467 1997 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 MPSTP25325 297 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 LSP1P33241 339 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 HK2P52789 917 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 E2F1Q01094 437 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 IRF8Q02556 426 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 ZFP36L1Q07352 338 aaKnown RBP12.75□□□□□ -0.37
CNN3-203ENST00000415017 XKR6Q5GH73 641 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 C10orf62Q5T681 223 aaPredicted RBP12.75□□□□□ -0.37
CNN3-203ENST00000415017 FIGLAQ6QHK4 219 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 RNF44Q7L0R7 432 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 TRIM73Q86UV7 250 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 KMT5CQ86Y97 462 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 FAM20CQ8IXL6 584 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 CLYBLQ8N0X4 340 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 DNAJC22Q8N4W6 341 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 ZNF740Q8NDX6 193 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 STON2Q8WXE9 905 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 NCSTNQ92542 709 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 USP7Q93009 1102 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 TM4SF19Q96DZ7 209 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 CFAP54Q96N23 3096 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 ZNF285Q96NJ3 590 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 PRAP1Q96NZ9 151 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 CDK15Q96Q40 435 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 MAP3K3Q99759 626 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 ILKAPQ9H0C8 392 aaPredicted RBP12.75□□□□□ -0.37
CNN3-203ENST00000415017 ACTR8Q9H981 624 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 TRAF6Q9Y4K3 522 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 DNAJC15Q9Y5T4 150 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms