RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 UACAQ9BZF9 1416 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 ARHGEF12Q9NZN5 1544 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 SCN5AQ14524 2016 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 FRMPD1Q5SYB0 1578 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 EIF2AK4Q9P2K8 1649 aaKnown RBP3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 MAP3K4Q9Y6R4 1608 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 MROH2AA6NES4 1674 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 SPHKAPQ2M3C7 1700 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 SIGLEC1Q9BZZ2 1709 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 SNX3O60493 162 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 DDHD2O94830 711 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 CENPBP07199 599 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 AZGP1P25311 298 aaKnown RBP3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 CD27P26842 260 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 HSD17B3P37058 310 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 BMXP51813 675 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 NAGLUP54802 743 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 MZT1Q08AG7 82 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 ZFP69Q49AA0 526 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 PWWP2BQ6NUJ5 590 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 PPP1R21Q6ZMI0 780 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 DCLK2Q8N568 766 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 NOA1Q8NC60 698 aaKnown RBP3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 C9orf43Q8TAL5 461 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 C4orf45Q96LM5 186 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 FUCA2Q9BTY2 467 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 PRRG4Q9BZD6 226 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 P2RY12Q9H244 342 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 PPANQ9NQ55 473 aaKnown RBP3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 PFDN4Q9NQP4 134 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 BARHL2Q9NY43 387 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 TNNQ9UQP3 1299 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 KIF13AQ9H1H9 1805 aa3.34□□□□□ -1.87
HMGB1P11-201ENST00000413899 PTPRGP23470 1445 aa3.34□□□□□ -1.88
HMGB1P11-201ENST00000413899 KDM5CP41229 1560 aa3.34□□□□□ -1.88
HMGB1P11-201ENST00000413899 VWDEQ8N2E2 1590 aa3.34□□□□□ -1.88
HMGB1P11-201ENST00000413899 ABCA6Q8N139 1617 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 TRBV5-5A0A0J9YX44 114 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 EPHB6O15197 1021 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 RPS6KA5O75582 802 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 SIX3O95343 332 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 GSRP00390 522 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 PENKP01210 267 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 FDPSP14324 419 aaKnown RBP3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 MYL6BP14649 208 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 DARSP14868 501 aaKnown RBP3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 ACAT1P24752 427 aaKnown RBP3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 NPY4RP50391 375 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 ILF2Q12905 390 aaKnown RBP3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 PSMD6Q15008 389 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 PTGISQ16647 500 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 UGCGQ16739 394 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 FAM133BQ5BKY9 247 aaKnown RBP3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 SPECC1Q5M775 1068 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 LCN1P1Q5VSP4 162 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 SUSD4Q5VX71 490 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 SLC25A47Q6Q0C1 308 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 SUSD1Q6UWL2 747 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 ENPP7Q6UWV6 458 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 TMEM207Q6UWW9 146 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 C11orf57Q6ZUT1 292 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 LACC1Q8IV20 430 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 CCAR2Q8N163 923 aaKnown RBP3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 ANKRD13CQ8N6S4 541 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 DBF4BQ8NFT6 615 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 OR10G8Q8NGN5 311 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 OR1L3Q8NH93 324 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 ZNRF4Q8WWF5 429 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 KCNE4Q8WWG9 221 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 DOCK7Q96N67 2140 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 SPAG5Q96R06 1193 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 CCDC3Q9BQI4 270 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 FAM129AQ9BZQ8 928 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 FAM49AQ9H0Q0 323 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 ACTL8Q9H568 366 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 XAB2Q9HCS7 855 aaKnown RBP3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 MAN2C1Q9NTJ4 1040 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 CACNG5Q9UF02 275 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 EPHA6Q9UF33 1036 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 C19orf25Q9UFG5 118 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 ANAPC5Q9UJX4 755 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 SNX7Q9UNH6 387 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 CHKBQ9Y259 395 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 MRPS28Q9Y2Q9 187 aaKnown RBP3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 CLSPNQ9HAW4 1339 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 ROCK1Q13464 1354 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 CFAP74Q9C0B2 1584 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 RIMBP3CA6NJZ7 1639 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 RIMBP3BA6NNM3 1639 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 TRPM1Q7Z4N2 1603 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 RIMBP3Q9UFD9 1639 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 TAF1P21675 1872 aa3.33□□□□□ -1.88
HMGB1P11-201ENST00000413899 TSPY2A6NKD2 308 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 ZNF821O75541 412 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 IFNAR1P17181 557 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 ADRA2CP18825 462 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 NKX2-1P43699 371 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 LEPRP48357 1165 aaKnown RBP3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 MTCP1P56278 107 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 GSDMDP57764 484 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms