RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 GSTA2P09210 222 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 PIM1P11309 404 aaPredicted RBP14.14□□□□□ -0.15
LIMS4-201ENST00000413601 AP1S2P56377 157 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 GUCY2DQ02846 1103 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 RELAQ04206 551 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 SSPNQ14714 243 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 HKDC1Q2TB90 917 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 PRTGQ2VWP7 1150 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 SBSNQ6UWP8 590 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 COX15Q7KZN9 410 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 OVCH1Q7RTY7 1134 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 RAB43Q86YS6 212 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 NKAPQ8N5F7 415 aaKnown RBP14.14□□□□□ -0.15
LIMS4-201ENST00000413601 NOA1Q8NC60 698 aaKnown RBP14.14□□□□□ -0.15
LIMS4-201ENST00000413601 OR2Y1Q8NGV0 311 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 ANKRD49Q8WVL7 239 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 RERGQ96A58 199 aaPredicted RBP14.14□□□□□ -0.15
LIMS4-201ENST00000413601 PYCR2Q96C36 320 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 CABS1Q96KC9 395 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 C10orf90Q96M02 699 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 CPNE1Q99829 537 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 SGPP1Q9BX95 441 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 PCBD2Q9H0N5 130 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 ING2Q9H160 280 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 CAB39LQ9H9S4 337 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 LRRC4CQ9HCJ2 640 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 ACSS2Q9NR19 701 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 ZDHHC18Q9NUE0 388 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 TMEM184CQ9NVA4 438 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 TXNDC16Q9P2K2 825 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 RUVBL1Q9Y265 456 aaKnown RBP14.14□□□□□ -0.15
LIMS4-201ENST00000413601 TP53TG5Q9Y2B4 290 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 BOD1L1Q8NFC6 3051 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 NPEPPSL1A6NEC2 478 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 MKRN2OSH3BPM6 223 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 K7EM74 188 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 ONECUT2O95948 504 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 STATHP02808 62 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 ENO2P09104 434 aaPredicted RBP14.13□□□□□ -0.15
LIMS4-201ENST00000413601 PLA2G2AP14555 144 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 NPPBP16860 134 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 NR1D1P20393 614 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 CCND1P24385 295 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 CCL11P51671 97 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 SLC12A2P55011 1212 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 POU4F1Q01851 419 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 ATP1A4Q13733 1029 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 MUM1Q2TAK8 710 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 KBTBD12Q3ZCT8 623 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 CAPN13Q6MZZ7 669 aaPredicted RBP14.13□□□□□ -0.15
LIMS4-201ENST00000413601 LCTLQ6UWM7 567 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 PRICKLE2Q7Z3G6 844 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 C17orf64Q86WR6 236 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 CTAGE3PQ8IX95 158 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 MMGT1Q8N4V1 131 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 CSNK1A1LQ8N752 337 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 OR56A3Q8NH54 315 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 FBF1Q8TES7 1133 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 FKBP10Q96AY3 582 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 PTERQ96BW5 349 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 FBXL8Q96CD0 374 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 RBBP8Q99708 897 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 GPAMQ9HCL2 828 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 ZNF304Q9HCX3 659 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 CTSFQ9UBX1 484 aa14.13□□□□□ -0.15
LIMS4-201ENST00000413601 HEMK1Q9Y5R4 338 aaPredicted RBP14.13□□□□□ -0.15
LIMS4-201ENST00000413601 SCN2AQ99250 2005 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 KIF2AO00139 706 aaPredicted RBP14.12□□□□□ -0.15
LIMS4-201ENST00000413601 P2RX6O15547 441 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 SLC28A2O43868 658 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 FAM155BO75949 473 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 ALBP02768 609 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 TUBB4AP04350 444 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 UMODP07911 640 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 CDH1P12830 882 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 HRH2P25021 359 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 GP5P40197 560 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 EMP3P54852 163 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 CSNK1G2P78368 415 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 ILF2Q12905 390 aaKnown RBP14.12□□□□□ -0.15
LIMS4-201ENST00000413601 USP10Q14694 798 aaKnown RBP14.12□□□□□ -0.15
LIMS4-201ENST00000413601 NKG7Q16617 165 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 PPP1R3AQ16821 1122 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 LACTB2Q53H82 288 aaPredicted RBP14.12□□□□□ -0.15
LIMS4-201ENST00000413601 SHISA6Q6ZSJ9 500 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 MRGPREQ86SM8 312 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 PPM1NQ8N819 430 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 MNS1Q8NEH6 495 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 ANKRD7Q92527 254 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 COL26A1Q96A83 441 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 OR4K3Q96R72 315 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 GPR22Q99680 433 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 UNKQ9C0B0 810 aaKnown RBP14.12□□□□□ -0.15
LIMS4-201ENST00000413601 WDR54Q9H977 334 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 POPDC3Q9HBV1 291 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 CTNNAL1Q9UBT7 734 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 DMGDHQ9UI17 866 aaKnown RBP14.12□□□□□ -0.15
LIMS4-201ENST00000413601 NOVA2Q9UNW9 492 aaKnown RBP14.12□□□□□ -0.15
LIMS4-201ENST00000413601 DOCK10Q96BY6 2186 aa14.12□□□□□ -0.15
LIMS4-201ENST00000413601 CFAP46Q8IYW2 2715 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms