RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 TPP2P29144 1249 aaPredicted RBP8.27□□□□□ -1.09
SYNE1-211ENST00000413186 PXNP49023 591 aaPredicted RBP8.27□□□□□ -1.09
SYNE1-211ENST00000413186 TRAP1Q12931 704 aaKnown RBP8.27□□□□□ -1.09
SYNE1-211ENST00000413186 C2orf76Q3KRA6 126 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 LEXMQ3ZCV2 418 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 ZNF549Q6P9A3 640 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 NUDT13Q86X67 352 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 CRIPAKQ8N1N5 446 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 TSACCQ96A04 125 aaPredicted RBP8.27□□□□□ -1.09
SYNE1-211ENST00000413186 MAGED4Q96JG8 741 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 ZNF382Q96SR6 550 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 PIGUQ9H490 435 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 ANKHQ9HCJ1 492 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 PNO1Q9NRX1 252 aaKnown RBP8.27□□□□□ -1.09
SYNE1-211ENST00000413186 HRASLS2Q9NWW9 162 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 SCN3BQ9NY72 215 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 VPS29Q9UBQ0 182 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 AP4S1Q9Y587 144 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 TRIP11Q15643 1979 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 KIR2DS5A0A0G2JLQ3 304 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 A0A0G2JNG1 304 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 I6L893 689 aaPredicted RBP8.27□□□□□ -1.09
SYNE1-211ENST00000413186 KIR2DS3K7RE56 304 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 TAF4O00268 1085 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 B3GALT2O43825 422 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 TNFAIP8O95379 198 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 RFX3P48380 749 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 RAB28P51157 221 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 C2orf80Q0P641 193 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 STX4Q12846 297 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 KIR2DS5Q14953 304 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 UAP1L1Q3KQV9 507 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 SPIN4Q56A73 249 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 TBCELQ5QJ74 424 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 DDI2Q5TDH0 399 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 GOLGA7Q7Z5G4 137 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 CEP97Q8IW35 865 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 FBXW8Q8N3Y1 598 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 GALNT4Q8N4A0 578 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 RLN3Q8WXF3 142 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 RGMAQ96B86 450 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 MYEOVQ96EZ4 313 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 VPS35Q96QK1 796 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 PANX1Q96RD7 426 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 SLC12A9Q9BXP2 914 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 EPHX3Q9H6B9 360 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 LTB4R2Q9NPC1 389 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 HS3ST3A1Q9Y663 406 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 DGKBQ9Y6T7 804 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 RFXANKO14593 260 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 HS6ST1O60243 411 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 NUAK1O60285 661 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 MLLT3P42568 568 aaPredicted RBP8.27□□□□□ -1.09
SYNE1-211ENST00000413186 ADARP55265 1226 aaKnown RBP8.27□□□□□ -1.09
SYNE1-211ENST00000413186 ERVK-8P63133 956 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 CSTF3Q12996 717 aaKnown RBP8.27□□□□□ -1.09
SYNE1-211ENST00000413186 LIPJQ5W064 366 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 ABHD13Q7L211 337 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 DHDDSQ86SQ9 333 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 ALYREFQ86V81 257 aaKnown RBP8.27□□□□□ -1.09
SYNE1-211ENST00000413186 ZNF683Q8IZ20 524 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 PLD6Q8N2A8 252 aaKnown RBP8.27□□□□□ -1.09
SYNE1-211ENST00000413186 H2AFY2Q9P0M6 372 aaPredicted RBP8.27□□□□□ -1.09
SYNE1-211ENST00000413186 ATXN10Q9UBB4 475 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 ENOPH1Q9UHY7 261 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 TMED5Q9Y3A6 229 aa8.27□□□□□ -1.09
SYNE1-211ENST00000413186 NUP205Q92621 2012 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 A0A0G2JPF8 293 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 HNRNPCL3B7ZW38 293 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 DUX1O43812 170 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 TRIM3O75382 744 aaPredicted RBP8.26□□□□□ -1.09
SYNE1-211ENST00000413186 LDLRP01130 860 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 HNRNPCL4P0DMR1 293 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 PIM1P11309 404 aaPredicted RBP8.26□□□□□ -1.09
SYNE1-211ENST00000413186 MAGEA8P43361 318 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 PTDSS1P48651 473 aaKnown RBP8.26□□□□□ -1.09
SYNE1-211ENST00000413186 PRLHRP49683 370 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 MANFP55145 182 aaKnown RBP8.26□□□□□ -1.09
SYNE1-211ENST00000413186 SRSF11Q05519 484 aaKnown RBP8.26□□□□□ -1.09
SYNE1-211ENST00000413186 C1orf61Q13536 156 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 SIM2Q14190 667 aaPredicted RBP8.26□□□□□ -1.09
SYNE1-211ENST00000413186 ZNF678Q5SXM1 525 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 TTC33Q6PID6 262 aaPredicted RBP8.26□□□□□ -1.09
SYNE1-211ENST00000413186 FRMD7Q6ZUT3 714 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 CHMP1BQ7LBR1 199 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 PGAM4Q8N0Y7 254 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 ZNF614Q8N883 585 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 UXS1Q8NBZ7 420 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 OR2L2Q8NH16 312 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 METTL21AQ8WXB1 218 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 GAL3ST3Q96A11 431 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 SPATA5L1Q9BVQ7 753 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 PAIP1Q9H074 479 aaKnown RBP8.26□□□□□ -1.09
SYNE1-211ENST00000413186 C1orf21Q9H246 121 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 ZNF225Q9UK10 706 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 SPEF1Q9Y4P9 236 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.26□□□□□ -1.09
SYNE1-211ENST00000413186 NRP2O60462 931 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 FAM58BPP0C7Q3 252 aa8.26□□□□□ -1.09
SYNE1-211ENST00000413186 ARCN1P48444 511 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms