RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 MAK16Q9BXY0 300 aaKnown RBP5.18□□□□□ -1.58
LINC00342-201ENST00000412393 TEX101Q9BY14 249 aa5.18□□□□□ -1.58
LINC00342-201ENST00000412393 GSDMCQ9BYG8 508 aa5.18□□□□□ -1.58
LINC00342-201ENST00000412393 FRMD8Q9BZ67 464 aaPredicted RBP5.18□□□□□ -1.58
LINC00342-201ENST00000412393 OSBPL8Q9BZF1 889 aa5.18□□□□□ -1.58
LINC00342-201ENST00000412393 TRIM31Q9BZY9 425 aa5.18□□□□□ -1.58
LINC00342-201ENST00000412393 ABCG8Q9H221 673 aa5.18□□□□□ -1.58
LINC00342-201ENST00000412393 DPEP2Q9H4A9 486 aa5.18□□□□□ -1.58
LINC00342-201ENST00000412393 TRABDQ9H4I3 376 aa5.18□□□□□ -1.58
LINC00342-201ENST00000412393 STN1Q9H668 368 aaKnown RBP5.18□□□□□ -1.58
LINC00342-201ENST00000412393 POLR1BQ9H9Y6 1135 aa5.18□□□□□ -1.58
LINC00342-201ENST00000412393 KCNK13Q9HB14 408 aa5.18□□□□□ -1.58
LINC00342-201ENST00000412393 PCDH9Q9HC56 1237 aa5.18□□□□□ -1.58
LINC00342-201ENST00000412393 TBCCD1Q9NVR7 557 aa5.18□□□□□ -1.58
LINC00342-201ENST00000412393 MKS1Q9NXB0 559 aa5.18□□□□□ -1.58
LINC00342-201ENST00000412393 DDX56Q9NY93 547 aaKnown RBP5.18□□□□□ -1.58
LINC00342-201ENST00000412393 PTTG2Q9NZH5 202 aa5.18□□□□□ -1.58
LINC00342-201ENST00000412393 CD84Q9UIB8 345 aa5.18□□□□□ -1.58
LINC00342-201ENST00000412393 BLOC1S6Q9UL45 172 aa5.18□□□□□ -1.58
LINC00342-201ENST00000412393 DNPEPQ9ULA0 475 aa5.18□□□□□ -1.58
LINC00342-201ENST00000412393 HEY1Q9Y5J3 304 aa5.18□□□□□ -1.58
LINC00342-201ENST00000412393 ENTPD2Q9Y5L3 495 aa5.18□□□□□ -1.58
LINC00342-201ENST00000412393 CHD6Q8TD26 2715 aa5.18□□□□□ -1.58
LINC00342-201ENST00000412393 ZZEF1O43149 2961 aa5.18□□□□□ -1.58
LINC00342-201ENST00000412393 FREM2Q5SZK8 3169 aa5.18□□□□□ -1.58
LINC00342-201ENST00000412393 ASPMQ8IZT6 3477 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 DSPP15924 2871 aaKnown RBP5.17□□□□□ -1.58
LINC00342-201ENST00000412393 CCDC187A0A096LP49 1063 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 TCRBV7S2A1N4TA0A589 114 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 CAPN8A6NHC0 703 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 C3orf70A6NLC5 250 aaPredicted RBP5.17□□□□□ -1.58
LINC00342-201ENST00000412393 ZNF839A8K0R7 811 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 B4DGG1 531 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 KCNK1O00180 336 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 NTN3O00634 580 aaPredicted RBP5.17□□□□□ -1.58
LINC00342-201ENST00000412393 CASC3O15234 703 aaKnown RBP5.17□□□□□ -1.58
LINC00342-201ENST00000412393 GYG2O15488 501 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 PSTPIP1O43586 416 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 BUD23O43709 281 aaKnown RBP5.17□□□□□ -1.58
LINC00342-201ENST00000412393 SPOPO43791 374 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 CLDN7O95471 211 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 PRLP01236 227 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 RPLP0P05388 317 aaKnown RBP5.17□□□□□ -1.58
LINC00342-201ENST00000412393 PYGLP06737 847 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 MMP2P08253 660 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 ANPEPP15144 967 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 ZFXP17010 805 aaPredicted RBP5.17□□□□□ -1.58
LINC00342-201ENST00000412393 KRT15P19012 456 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 RBMS1P29558 406 aaKnown RBP5.17□□□□□ -1.58
LINC00342-201ENST00000412393 CD86P42081 329 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 ETV4P43268 484 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 SLCO1A2P46721 670 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 GNPDA1P46926 289 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 POLD2P49005 469 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 STC1P52823 247 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 ITGA8P53708 1063 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 ERVPABLB-1P60509 514 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 AP2B1P63010 937 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 DYNLT1P63172 113 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 CCL7P80098 99 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 CDK16Q00536 496 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 COL10A1Q03692 680 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 ASPHQ12797 758 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 ILF3Q12906 894 aaKnown RBP eCLIP5.17□□□□□ -1.58
LINC00342-201ENST00000412393 ZBTB17Q13105 803 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 RCN2Q14257 317 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 MYBPC3Q14896 1274 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 PDK1Q15118 436 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 RCN1Q15293 331 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 DNAL1Q4LDG9 190 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 C14orf28Q4W4Y0 310 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 TAF1BQ53T94 588 aaPredicted RBP5.17□□□□□ -1.58
LINC00342-201ENST00000412393 CD276Q5ZPR3 534 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 SLC9A4Q6AI14 798 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 KLC3Q6P597 504 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 PGM2L1Q6PCE3 622 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 DOK6Q6PKX4 331 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 MFSD7Q6UXD7 560 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 NPNTQ6UXI9 565 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 CYS1Q717R9 158 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 PCGF5Q86SE9 256 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 NRROSQ86YC3 692 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 CROCCP3Q8IVE0 287 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 RHOT1Q8IXI2 618 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 NRSN1Q8IZ57 195 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 ZNF808Q8N4W9 903 aaPredicted RBP5.17□□□□□ -1.58
LINC00342-201ENST00000412393 PLD5Q8N7P1 536 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 CNTD1Q8N815 330 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 Q8N9G6 341 aaPredicted RBP5.17□□□□□ -1.58
LINC00342-201ENST00000412393 BANPQ8N9N5 519 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 LSM14AQ8ND56 463 aaKnown RBP5.17□□□□□ -1.58
LINC00342-201ENST00000412393 ZNF248Q8NDW4 579 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 LPCAT1Q8NF37 534 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 CCL4L1Q8NHW4 92 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 WDR36Q8NI36 951 aaKnown RBP5.17□□□□□ -1.58
LINC00342-201ENST00000412393 SCAMP4Q969E2 229 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 AP2M1Q96CW1 435 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 HIC2Q96JB3 615 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 C7orf26Q96N11 449 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms