RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 HOXB9P17482 250 aaPredicted RBP13.13□□□□□ -0.31
LIMS1-205ENST00000410093 KELP23276 732 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 MYF6P23409 242 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 FCARP24071 287 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 OXTRP30559 389 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 SERPINB1P30740 379 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 HPCAL1P37235 193 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 PIK3CBP42338 1070 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 NR1H2P55055 460 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 ENPP2Q13822 863 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 PLA2G4EQ3MJ16 856 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 SLCO4C1Q6ZQN7 724 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 RALGPS2Q86X27 583 aaPredicted RBP13.13□□□□□ -0.31
LIMS1-205ENST00000410093 CBR4Q8N4T8 237 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 KRTCAP2Q8N6L1 136 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 C12orf76Q8N812 135 aaPredicted RBP13.13□□□□□ -0.31
LIMS1-205ENST00000410093 ELSPBP1Q96BH3 223 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 TBC1D20Q96BZ9 403 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 SDCCAG3Q96C92 435 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 MED8Q96G25 268 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 APIPQ96GX9 242 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 APOLD1Q96LR9 279 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 TSC22D3Q99576 134 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 SLC29A1Q99808 456 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 OR2AG1Q9H205 316 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 PRSS16Q9NQE7 514 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 SERHLQ9NQF3 203 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 SMPD3Q9NY59 655 aaPredicted RBP13.13□□□□□ -0.31
LIMS1-205ENST00000410093 DNAJB9Q9UBS3 223 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 BTNL2Q9UIR0 455 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 PCDHB14Q9Y5E9 798 aa13.13□□□□□ -0.31
LIMS1-205ENST00000410093 TMEM202A6NGA9 273 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 E7EQ34 232 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 SOCS2O14508 198 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 PRAMEF4O60810 478 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 MMP20O60882 483 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 POP7O75817 140 aaKnown RBP13.12□□□□□ -0.31
LIMS1-205ENST00000410093 KAT7O95251 611 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 CCNDBP1O95273 360 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 C1GALT1C1LP0DN25 315 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 CKMT2P17540 419 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 C5AR1P21730 350 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 ACADLP28330 430 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 GJA4P35212 333 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 OPRD1P41143 372 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 TNFRSF4P43489 277 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 PREPP48147 710 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 NEK2P51955 445 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 MERTKQ12866 999 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 KCTD21Q4G0X4 260 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 PRAMEF9Q5VWM5 478 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 BORAQ6PGQ7 559 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 VITQ6UXI7 678 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 GET4Q7L5D6 327 aaPredicted RBP13.12□□□□□ -0.31
LIMS1-205ENST00000410093 R3HCC1LQ7Z5L2 792 aaKnown RBP13.12□□□□□ -0.31
LIMS1-205ENST00000410093 SYTL1Q8IYJ3 562 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 OXR1Q8N573 874 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 NATD1Q8N6N6 113 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 ZNF366Q8N895 744 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 OR7G3Q8NG95 312 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 OR10A6Q8NH74 314 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 ZFP28Q8NHY6 868 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 ZNF480Q8WV37 535 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 CHTF18Q8WVB6 975 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 MTERF3Q96E29 417 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 RNF145Q96MT1 663 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 PHF12Q96QT6 1004 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 DCAF13Q9NV06 445 aaKnown RBP13.12□□□□□ -0.31
LIMS1-205ENST00000410093 ATAD3AQ9NVI7 634 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 SLC25A37Q9NYZ2 338 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 GMPR2Q9P2T1 348 aaKnown RBP13.12□□□□□ -0.31
LIMS1-205ENST00000410093 ATXN10Q9UBB4 475 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 OAZ3Q9UMX2 235 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 SAMD4AQ9UPU9 718 aaKnown RBP13.12□□□□□ -0.31
LIMS1-205ENST00000410093 ITM2BQ9Y287 266 aa13.12□□□□□ -0.31
LIMS1-205ENST00000410093 COL4A3Q01955 1670 aa13.11□□□□□ -0.31
LIMS1-205ENST00000410093 EIF4E1BA6NMX2 242 aaKnown RBP13.11□□□□□ -0.31
LIMS1-205ENST00000410093 ACOX3O15254 700 aa13.11□□□□□ -0.31
LIMS1-205ENST00000410093 MAP3K13O43283 966 aa13.11□□□□□ -0.31
LIMS1-205ENST00000410093 GPR37L1O60883 481 aa13.11□□□□□ -0.31
LIMS1-205ENST00000410093 EPN2O95208 641 aa13.11□□□□□ -0.31
LIMS1-205ENST00000410093 EPHX1P07099 455 aa13.11□□□□□ -0.31
LIMS1-205ENST00000410093 HLA-EP13747 358 aa13.11□□□□□ -0.31
LIMS1-205ENST00000410093 NCK1P16333 377 aa13.11□□□□□ -0.31
LIMS1-205ENST00000410093 COL9A1P20849 921 aa13.11□□□□□ -0.31
LIMS1-205ENST00000410093 CXCR2P25025 360 aa13.11□□□□□ -0.31
LIMS1-205ENST00000410093 PTPN6P29350 595 aa13.11□□□□□ -0.31
LIMS1-205ENST00000410093 P2RY2P41231 377 aa13.11□□□□□ -0.31
LIMS1-205ENST00000410093 GSTM5P46439 218 aa13.11□□□□□ -0.31
LIMS1-205ENST00000410093 RPS9P46781 194 aaKnown RBP13.11□□□□□ -0.31
LIMS1-205ENST00000410093 RXRGP48443 463 aa13.11□□□□□ -0.31
LIMS1-205ENST00000410093 MYBPC1Q00872 1141 aa13.11□□□□□ -0.31
LIMS1-205ENST00000410093 APOFQ13790 326 aa13.11□□□□□ -0.31
LIMS1-205ENST00000410093 SELPLGQ14242 412 aa13.11□□□□□ -0.31
LIMS1-205ENST00000410093 PGS1Q32NB8 556 aa13.11□□□□□ -0.31
LIMS1-205ENST00000410093 POM121L1PQ3SYA9 428 aa13.11□□□□□ -0.31
LIMS1-205ENST00000410093 SLC36A3Q495N2 470 aa13.11□□□□□ -0.31
LIMS1-205ENST00000410093 ZNF648Q5T619 568 aaPredicted RBP13.11□□□□□ -0.31
LIMS1-205ENST00000410093 PNCKQ6P2M8 343 aa13.11□□□□□ -0.31
LIMS1-205ENST00000410093 LCTLQ6UWM7 567 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms