RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 POLE4Q9NR33 117 aa12.99□□□□□ -0.33
COL6A2-204ENST00000409416 RAB23Q9ULC3 237 aa12.99□□□□□ -0.33
COL6A2-204ENST00000409416 WDR37Q9Y2I8 494 aa12.99□□□□□ -0.33
COL6A2-204ENST00000409416 PCDHB14Q9Y5E9 798 aa12.99□□□□□ -0.33
COL6A2-204ENST00000409416 FPGTO14772 594 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 CLPXO76031 633 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 RECQL5O94762 991 aaPredicted RBP12.98□□□□□ -0.33
COL6A2-204ENST00000409416 APOL3O95236 402 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 NADKO95544 446 aaPredicted RBP12.98□□□□□ -0.33
COL6A2-204ENST00000409416 SOD2P04179 222 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 DDX5P17844 614 aaKnown RBP12.98□□□□□ -0.33
COL6A2-204ENST00000409416 IGFBP5P24593 272 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 IRS1P35568 1242 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 ARHGDIAP52565 204 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 TRAF3Q13114 568 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 SMN1Q16637 294 aaKnown RBP12.98□□□□□ -0.33
COL6A2-204ENST00000409416 C2orf27AQ580R0 203 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 CCSAPQ6IQ19 270 aaPredicted RBP12.98□□□□□ -0.33
COL6A2-204ENST00000409416 TNFAIP8L2Q6P589 184 aaPredicted RBP12.98□□□□□ -0.33
COL6A2-204ENST00000409416 ZDHHC21Q8IVQ6 265 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 TAGAPQ8N103 731 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 STK40Q8N2I9 435 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 ZNF740Q8NDX6 193 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 CHDHQ8NE62 594 aaPredicted RBP12.98□□□□□ -0.33
COL6A2-204ENST00000409416 RAB2BQ8WUD1 216 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 GTPBP3Q969Y2 492 aaKnown RBP12.98□□□□□ -0.33
COL6A2-204ENST00000409416 RBM4BQ9BQ04 359 aaKnown RBP12.98□□□□□ -0.33
COL6A2-204ENST00000409416 RHNO1Q9BSD3 238 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 RBM4Q9BWF3 364 aaKnown RBP12.98□□□□□ -0.33
COL6A2-204ENST00000409416 RHBGQ9H310 441 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 ERVK-18Q9QC07 812 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 GREB1Q4ZG55 1949 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 H0YAE9 185 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 MYO1DO94832 1006 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 PABPC1P11940 636 aaKnown RBP12.98□□□□□ -0.33
COL6A2-204ENST00000409416 MLLT10P55197 1068 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 MESP2Q0VG99 397 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 RAPSNQ13702 412 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 C22orf39Q6P5X5 142 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 RIMKLAQ8IXN7 391 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 ALDH16A1Q8IZ83 802 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 C10orf111Q8N326 155 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 LEMD2Q8NC56 503 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 ZNF540Q8NDQ6 660 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 TANKQ92844 425 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 CSF3RQ99062 836 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 BARD1Q99728 777 aaKnown RBP12.98□□□□□ -0.33
COL6A2-204ENST00000409416 EQTNQ9NQ60 294 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 SLC25A37Q9NYZ2 338 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 PDP1Q9P0J1 537 aaPredicted RBP12.98□□□□□ -0.33
COL6A2-204ENST00000409416 PCM1Q15154 2024 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 CCDC88CQ9P219 2028 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 UPK1AO00322 258 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 TAPBPO15533 448 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 FAM20BO75063 409 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 FUCA1P04066 466 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 PCCBP05166 539 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 CDH3P22223 829 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 HTR1BP28222 390 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 HMGCLP35914 325 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 EIF2B2P49770 351 aaKnown RBP12.98□□□□□ -0.33
COL6A2-204ENST00000409416 RING1Q06587 406 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 DNASE1L3Q13609 305 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 SKIV2LQ15477 1246 aaKnown RBP12.98□□□□□ -0.33
COL6A2-204ENST00000409416 Q6ZNX1 250 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 HSD11B1LQ7Z5J1 315 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 NELL1Q92832 810 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 FOPNLQ96NB1 174 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 KLF16Q9BXK1 252 aaPredicted RBP12.98□□□□□ -0.33
COL6A2-204ENST00000409416 ASPSCR1Q9BZE9 553 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 HEBP1Q9NRV9 189 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 IMP3Q9NV31 184 aaKnown RBP12.98□□□□□ -0.33
COL6A2-204ENST00000409416 OGDHLQ9ULD0 1010 aa12.98□□□□□ -0.33
COL6A2-204ENST00000409416 CBFA2T3O75081 653 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 BCAS1O75363 584 aaPredicted RBP12.97□□□□□ -0.33
COL6A2-204ENST00000409416 EPHX1P07099 455 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 ANXA4P09525 319 aaPredicted RBP12.97□□□□□ -0.33
COL6A2-204ENST00000409416 TM4SF4P48230 202 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 TP53BP2Q13625 1128 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 MOGQ16653 247 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 CATSPEREQ5SY80 951 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 DCDC5Q6ZRR9 648 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 AHSA2Q719I0 299 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 GOLM1Q8NBJ4 401 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 ZNF548Q8NEK5 533 aaPredicted RBP12.97□□□□□ -0.33
COL6A2-204ENST00000409416 PLD4Q96BZ4 506 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 ZSWIM3Q96MP5 696 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 ZNF229Q9UJW7 825 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 MANBAO00462 879 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 NDUFS2O75306 463 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 CD160O95971 181 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 ACPPP15309 386 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 DCTP40126 519 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 IGFN1Q86VF2 1251 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 CHPFQ8IZ52 775 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 TMEM132CQ8N3T6 1108 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 PIH1D2Q8WWB5 315 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 RAB8BQ92930 207 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 SH3GL1Q99961 368 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 HEPHQ9BQS7 1158 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms