RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 PRR14Q9BWN1 585 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 CD320Q9NPF0 282 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 NEU3Q9UQ49 428 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 PCDHGA3Q9Y5H0 932 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 MAGEB17A8MXT2 336 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 M0QX08 132 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 SUV39H1O43463 412 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 SERPINB7O75635 380 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 AP2A2O94973 939 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 PRLP01236 227 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 VEPH1Q14D04 833 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 ARMCX4Q5H9R4 360 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 XAF1Q6GPH4 301 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 LAIR1Q6GTX8 287 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 Q6ZVL8 140 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 SPRED1Q7Z699 444 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 MFSD2AQ8NA29 543 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 ATL1Q8WXF7 558 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 DNASE1L2Q92874 299 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 CORO1BQ9BR76 489 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 UCKL1Q9NWZ5 548 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 GNPTGQ9UJJ9 305 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 MRPS7Q9Y2R9 242 aaKnown RBP8.08□□□□□ -1.12
SNX13-201ENST00000409076 A0A1W2PRU2 124 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 TMEM202A6NGA9 273 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 TAPBPO15533 448 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 TPD52L2O43399 206 aaKnown RBP8.08□□□□□ -1.12
SNX13-201ENST00000409076 IDH3BO43837 385 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 OGNP20774 298 aaKnown RBP8.08□□□□□ -1.12
SNX13-201ENST00000409076 DCKP27707 260 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 HTR1EP28566 365 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 LIPAP38571 399 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 ZNF140P52738 457 aaPredicted RBP8.08□□□□□ -1.12
SNX13-201ENST00000409076 ARF5P84085 180 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 ACOX1Q15067 660 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 TTLL9Q3SXZ7 439 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 TPRG1LQ5T0D9 272 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 PTCHD4Q6ZW05 846 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 RAET1EQ8TD07 263 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 JPH3Q8WXH2 748 aaPredicted RBP8.08□□□□□ -1.12
SNX13-201ENST00000409076 EID2BQ96D98 161 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 PGAP3Q96FM1 320 aaPredicted RBP8.08□□□□□ -1.12
SNX13-201ENST00000409076 CENPOQ9BU64 300 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 KAT8Q9H7Z6 458 aaKnown RBP8.08□□□□□ -1.12
SNX13-201ENST00000409076 IL26Q9NPH9 171 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 SIRT5Q9NXA8 310 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 INTS6Q9UL03 887 aaKnown RBP8.08□□□□□ -1.12
SNX13-201ENST00000409076 SCML2Q9UQR0 700 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 LYVE1Q9Y5Y7 322 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 SCN3AQ9NY46 2000 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 TET1Q8NFU7 2136 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 LOC285095A0A1B0GVY8 99 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 TNFRSF21O75509 655 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 ERAL1O75616 437 aaKnown RBP8.07□□□□□ -1.12
SNX13-201ENST00000409076 BPIP17213 487 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 ATF6P18850 670 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 GPC1P35052 558 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 CD97P48960 835 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 CLK3P49761 638 aaKnown RBP8.07□□□□□ -1.12
SNX13-201ENST00000409076 ADARB1P78563 741 aaKnown RBP8.07□□□□□ -1.12
SNX13-201ENST00000409076 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.07□□□□□ -1.12
SNX13-201ENST00000409076 WDR53Q7Z5U6 358 aaPredicted RBP8.07□□□□□ -1.12
SNX13-201ENST00000409076 RBFAQ8N0V3 343 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 LGI4Q8N135 537 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 NAGSQ8N159 534 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 SLC5A8Q8N695 610 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 ZNF614Q8N883 585 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 GPR26Q8NDV2 337 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 LZICQ8WZA0 190 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 COL26A1Q96A83 441 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 EXOSC8Q96B26 276 aaKnown RBP8.07□□□□□ -1.12
SNX13-201ENST00000409076 CSNK1G1Q9HCP0 422 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 MIEF1Q9NQG6 463 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 ZIM2Q9NZV7 527 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 LCTP09848 1927 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 EFCAB10A6NFE3 127 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 NPIPB15A6NHN6 443 aaPredicted RBP8.07□□□□□ -1.12
SNX13-201ENST00000409076 PSIP1O75475 530 aaKnown RBP8.07□□□□□ -1.12
SNX13-201ENST00000409076 C6orf47O95873 294 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 ZNF12P17014 697 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 TTKP33981 857 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 CACNG1Q06432 222 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 ABHD18Q0P651 414 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 CHST14Q8NCH0 376 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 ZNF548Q8NEK5 533 aaPredicted RBP8.07□□□□□ -1.12
SNX13-201ENST00000409076 PHF10Q8WUB8 498 aaKnown RBP8.07□□□□□ -1.12
SNX13-201ENST00000409076 TPT1P8Q9HAU6 139 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 MS4A12Q9NXJ0 267 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 NUDT4Q9NZJ9 180 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 ABCD2Q9UBJ2 740 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 ATP6V1HQ9UI12 483 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 PCDHB8Q9UN66 801 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 PRUNE2Q8WUY3 3088 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 MYLKQ15746 1914 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 HTR3EA5X5Y0 456 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 WASHC1A8K0Z3 465 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 E7EQ34 232 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 SMLR1H3BR10 107 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 CCRL2O00421 344 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 FRS3O43559 492 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms