RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 PLEKHS1Q5SXH7 462 aa12.12□□□□□ -0.47
ATG9A-203ENST00000409033 FAM129CQ86XR2 697 aa12.12□□□□□ -0.47
ATG9A-203ENST00000409033 MICU2Q8IYU8 434 aa12.12□□□□□ -0.47
ATG9A-203ENST00000409033 ABTB1Q969K4 478 aaPredicted RBP12.12□□□□□ -0.47
ATG9A-203ENST00000409033 ISG20Q96AZ6 181 aaKnown RBP12.12□□□□□ -0.47
ATG9A-203ENST00000409033 TMIGD2Q96BF3 282 aa12.12□□□□□ -0.47
ATG9A-203ENST00000409033 TESMINQ9Y4I5 508 aa12.12□□□□□ -0.47
ATG9A-203ENST00000409033 BPTFQ12830 3046 aa12.12□□□□□ -0.47
ATG9A-203ENST00000409033 COL4A6Q14031 1691 aa12.12□□□□□ -0.47
ATG9A-203ENST00000409033 ZFC3H1O60293 1989 aaKnown RBP12.12□□□□□ -0.47
ATG9A-203ENST00000409033 DNTTP04053 509 aa12.12□□□□□ -0.47
ATG9A-203ENST00000409033 OR1E2P47887 323 aa12.12□□□□□ -0.47
ATG9A-203ENST00000409033 NAA20P61599 178 aa12.12□□□□□ -0.47
ATG9A-203ENST00000409033 MYBPC1Q00872 1141 aa12.12□□□□□ -0.47
ATG9A-203ENST00000409033 RUNX3Q13761 415 aa12.12□□□□□ -0.47
ATG9A-203ENST00000409033 PAGE2BQ5JRK9 111 aa12.12□□□□□ -0.47
ATG9A-203ENST00000409033 OR52E8Q6IFG1 317 aa12.12□□□□□ -0.47
ATG9A-203ENST00000409033 ZNF480Q8WV37 535 aa12.12□□□□□ -0.47
ATG9A-203ENST00000409033 YIPF4Q9BSR8 244 aa12.12□□□□□ -0.47
ATG9A-203ENST00000409033 RPP25Q9BUL9 199 aaKnown RBP12.12□□□□□ -0.47
ATG9A-203ENST00000409033 PNPLA3Q9NST1 481 aa12.12□□□□□ -0.47
ATG9A-203ENST00000409033 CD300AQ9UGN4 299 aa12.12□□□□□ -0.47
ATG9A-203ENST00000409033 NDRG2Q9UN36 371 aaKnown RBP12.12□□□□□ -0.47
ATG9A-203ENST00000409033 FAM32AQ9Y421 112 aaKnown RBP12.12□□□□□ -0.47
ATG9A-203ENST00000409033 ASCC3Q8N3C0 2202 aaKnown RBP12.12□□□□□ -0.47
ATG9A-203ENST00000409033 WDR87Q6ZQQ6 2873 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 CCDC85CA6NKD9 419 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 QSOX1O00391 747 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 LINC01565O15544 149 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 CREG1O75629 220 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 ELK4P28324 431 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 MMP12P39900 470 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 CCNYL2Q5T2Q4 361 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 PROSER1Q86XN7 944 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 ZDHHC21Q8IVQ6 265 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 OR7G3Q8NG95 312 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 WFIKKN2Q8TEU8 576 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 GTF2H4Q92759 462 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 REXO5Q96IC2 774 aaKnown RBP12.11□□□□□ -0.47
ATG9A-203ENST00000409033 WDR26Q9H7D7 661 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 TRIM39Q9HCM9 518 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 EQTNQ9NQ60 294 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 AASDHPPTQ9NRN7 309 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 KIF1CO43896 1103 aaKnown RBP12.11□□□□□ -0.47
ATG9A-203ENST00000409033 C1QCP02747 245 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 PRPS2P11908 318 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 PHEXP78562 749 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 PRAMEF14Q5SWL7 426 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.11□□□□□ -0.47
ATG9A-203ENST00000409033 PRAMEF13Q5VWM6 474 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 FAM46CQ5VWP2 391 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 PDLIM5Q96HC4 596 aaKnown RBP12.11□□□□□ -0.47
ATG9A-203ENST00000409033 PCDHA9Q9Y5H5 950 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 TCRBV3S1A0A5B6 114 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 NUDT7P0C024 238 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 HSD17B1P14061 328 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 ZNF542PQ5EBM4 170 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 RAB42Q8N4Z0 105 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 LEMD2Q8NC56 503 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 NETO1Q8TDF5 533 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 RAD51AP1Q96B01 352 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 DTD2Q96FN9 168 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 RERGLQ9H628 205 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 RUVBL1Q9Y265 456 aaKnown RBP12.11□□□□□ -0.47
ATG9A-203ENST00000409033 RWDD3Q9Y3V2 267 aa12.11□□□□□ -0.47
ATG9A-203ENST00000409033 A6NHS1 94 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 LIN7AO14910 233 aaPredicted RBP12.1□□□□□ -0.47
ATG9A-203ENST00000409033 NUAK1O60285 661 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 TPST2O60704 377 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 C6orf47O95873 294 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 C8BP07358 591 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 GJA4P35212 333 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 SSR2P43308 183 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 CSNK1DP48730 415 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 ERVK-21P61565 698 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 TMED1Q13445 227 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 FGD3Q5JSP0 725 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 TRIM48Q8IWZ4 208 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 VANGL1Q8TAA9 524 aaPredicted RBP12.1□□□□□ -0.47
ATG9A-203ENST00000409033 OTUB2Q96DC9 234 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 MCCC1Q96RQ3 725 aaPredicted RBP12.1□□□□□ -0.47
ATG9A-203ENST00000409033 SLC29A3Q9BZD2 475 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 ACTL8Q9H568 366 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 RAD18Q9NS91 495 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 FZD4Q9ULV1 537 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 H3BQ06 376 aaPredicted RBP12.1□□□□□ -0.47
ATG9A-203ENST00000409033 RAP2AP10114 183 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 THRBP10828 461 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 JUPP14923 745 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 PTNP21246 168 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 IMPA1P29218 277 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 MAPK9P45984 424 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 ARMC3Q5W041 872 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 TICAM1Q8IUC6 712 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 ADHFE1Q8IWW8 467 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 TMEM145Q8NBT3 493 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 MUS81Q96NY9 551 aa12.1□□□□□ -0.47
ATG9A-203ENST00000409033 TRMT61BQ9BVS5 477 aaKnown RBP12.1□□□□□ -0.47
ATG9A-203ENST00000409033 CARS2Q9HA77 564 aaKnown RBP12.1□□□□□ -0.47
ATG9A-203ENST00000409033 TPT1P8Q9HAU6 139 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms