RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 IL17FQ96PD4 163 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 HHIPQ96QV1 700 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 AGPAT4Q9NRZ5 378 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 GEMIN8Q9NWZ8 242 aaKnown RBP23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 A0A1W2PQU0 124 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 PLRG1O43660 514 aaKnown RBP23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 KLF8O95600 359 aaPredicted RBP23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 COX7A2P14406 83 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 CTHP32929 405 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 ASMTP46597 345 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 POLE2P56282 527 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 PRKCQQ04759 706 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 SF1Q15637 639 aaKnown RBP23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 NRF1Q16656 503 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 PRAMEF14Q5SWL7 426 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 PRAMEF13Q5VWM6 474 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 ZBTB49Q6ZSB9 765 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 PAPD5Q8NDF8 572 aaKnown RBP23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 OR7A2PQ8NGA2 310 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 HAUS8Q9BT25 410 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 IKZF5Q9H5V7 419 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 SLC6A13Q9NSD5 602 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 AK5Q9Y6K8 562 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 ATG2BQ96BY7 2078 aa23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 CROCCQ5TZA2 2017 aa23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 PIPSLA2A3N6 862 aa23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 A6NHS1 94 aa23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 ANHXE9PGG2 379 aa23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 FOXE1O00358 373 aaPredicted RBP23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 RFXANKO14593 260 aa23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 RNGTTO60942 597 aaKnown RBP23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 EGFP01133 1207 aa23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 GSNP06396 782 aa23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 ANXA4P09525 319 aaPredicted RBP23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 SLC35G4P0C7Q5 338 aa23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 MTAPQ13126 283 aa23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 UGT8Q16880 541 aa23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 LCTLQ6UWM7 567 aa23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 GCNT7Q6ZNI0 430 aa23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 LAS2Q8IYD9 372 aa23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 C2orf73Q8N5S3 287 aaPredicted RBP23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 IL17RCQ8NAC3 791 aa23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 C11orf24Q96F05 449 aaPredicted RBP23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 CENPNQ96H22 339 aaPredicted RBP23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 CPPED1Q9BRF8 314 aaPredicted RBP23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 C1QTNF7Q9BXJ2 289 aa23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 SLC17A9Q9BYT1 436 aa23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 SLC6A17Q9H1V8 727 aa23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 ACSL5Q9ULC5 683 aa23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 MAPRE3Q9UPY8 281 aa23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 REV3LO60673 3130 aa23.79■■□□□ 1.4
DNMT3A-206ENST00000406659 ELOVL7A1L3X0 281 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 ZCCHC18P0CG32 403 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 MYCLP1P12525 358 aaPredicted RBP23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 HOXB2P14652 356 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 TRPC1P48995 793 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 HNRNPFP52597 415 aaKnown RBP23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 C21orf58P58505 322 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 RAE1P78406 368 aaKnown RBP23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 PON2Q15165 354 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 DUOXA1Q1HG43 343 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 MARVELD2Q8N4S9 558 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 ZNF548Q8NEK5 533 aaPredicted RBP23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 GPR156Q8NFN8 814 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 OR5K2Q8NHB8 316 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 FIG4Q92562 907 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 MSLNLQ96KJ4 702 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 NECTIN4Q96NY8 510 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 SEPHS2Q99611 448 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 REXO4Q9GZR2 422 aaKnown RBP23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 TRIT1Q9H3H1 467 aaKnown RBP23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 LMCD1Q9NZU5 365 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 CFAP20Q9Y6A4 193 aaKnown RBP23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 SAC3D1A6NKF1 404 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 CDH1P12830 882 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 LTBRP36941 435 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 HSD17B2P37059 387 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 CLCNKAP51800 687 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 ARHGAP19Q14CB8 494 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 C6orf52Q5T4I8 152 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 CHST15Q7LFX5 561 aaPredicted RBP23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 PHACTR4Q8IZ21 702 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 UBE2E3Q969T4 207 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 FAM120BQ96EK7 910 aaKnown RBP23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 ZNF597Q96LX8 424 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 SLC29A1Q99808 456 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 TBCDQ9BTW9 1192 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 KAT8Q9H7Z6 458 aaKnown RBP23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 GORASP2Q9H8Y8 452 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 V9GYQ6 96 aa23.78■■□□□ 1.4
DNMT3A-206ENST00000406659 NUMA1Q14980 2115 aa23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 TBC1D3DA0A087WVF3 549 aa23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 TBC1D3IA0A087WXS9 549 aa23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 TBC1D3EA0A087X179 549 aa23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 TBC1D3KA0A087X1G2 549 aa23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 FAM149AA5PLN7 773 aa23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 TBC1D3FA6NER0 549 aaPredicted RBP23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 TBC1D3LB9A6J9 549 aa23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 ADAM23O75077 832 aa23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 B3GALT4O96024 378 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms