RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 ZNF425Q6IV72 752 aa4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 CNSTQ6PJW8 725 aa4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 RAD9BQ6WBX8 426 aa4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 CLEC18CQ8NCF0 446 aa4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 OR4K1Q8NGD4 311 aa4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 LNX1Q8TBB1 728 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 CKAP2Q8WWK9 683 aa4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 IRGQQ8WZA9 623 aa4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 PGM2Q96G03 612 aa4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 LRRC1Q9BTT6 524 aa4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 PI4K2AQ9BTU6 479 aa4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 CACNG6Q9BXT2 260 aa4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 TM6SF1Q9BZW5 370 aa4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 MTMR12Q9C0I1 747 aa4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 RWDD1Q9H446 243 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 EBF2Q9HAK2 575 aa4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 DNAJC4Q9NNZ3 241 aa4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 SLC38A7Q9NVC3 462 aa4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 FBXW2Q9UKT8 454 aa4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 SLC7A7Q9UM01 511 aa4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 PA2G4Q9UQ80 394 aaKnown RBP4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 JRKLQ9Y4A0 524 aa4.45□□□□□ -1.7
HMGB3P18-201ENST00000406327 CDC42BPGQ6DT37 1551 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 CFAP65Q6ZU64 1925 aaKnown RBP4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 IGHV4OR15-8A0A075B7B6 117 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 A0A1W2PN81 502 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 A0A1W2PPI3 338 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 ILVBLA1L0T0 632 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 ZNF587BE7ETH6 402 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 E9PI62 339 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 ARPC2O15144 300 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 ATP6AP2O75787 350 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 OLFM2O95897 454 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 GSRP00390 522 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 SMIM18P0DKX4 95 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 ACP2P11117 423 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 P4HA1P13674 534 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 HLA-DOBP13765 273 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 ZNF12P17014 697 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 TKTP29401 623 aaKnown RBP4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 CHRNA7P36544 502 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 KCNJ1P48048 391 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 BRWD1-AS2P59051 145 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 PITX1P78337 314 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 KIR2DS3Q14952 304 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 SLC39A14Q15043 492 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 RPS6KA1Q15418 735 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 TAF13Q15543 124 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 CTU2Q2VPK5 515 aaKnown RBP4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 UGT3A2Q3SY77 523 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 SLC39A12Q504Y0 691 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 PDSS1Q5T2R2 415 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 CYP4A22Q5TCH4 519 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 LRRC38Q5VT99 294 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 TATDN1Q6P1N9 297 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 TMEM270Q6UE05 265 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 UNQ6126/PRO20091Q6UXV3 157 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 PIWIL4Q7Z3Z4 852 aaKnown RBP4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 ZNF554Q86TJ5 538 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 CRYBG2Q8N1P7 616 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 PELI3Q8N2H9 469 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 BMPERQ8N8U9 685 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 OR13J1Q8NGT2 312 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 P2RX5Q93086 422 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 SNX21Q969T3 373 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 FCRL4Q96PJ5 515 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 ATG101Q9BSB4 218 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 IL25Q9H293 177 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 THAP9Q9H5L6 903 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 Q9H8V8 135 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 PDRG1Q9NUG6 133 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 SPG21Q9NZD8 308 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 MALT1Q9UDY8 824 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 ZDHHC2Q9UIJ5 367 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 PTPRUQ92729 1446 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 ADGRB2O60241 1585 aa4.44□□□□□ -1.7
HMGB3P18-201ENST00000406327 ARHGAP23Q9P227 1491 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 TSPOAP1O95153 1857 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 NRXN3Q9Y4C0 1643 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 CPS1P31327 1500 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 A0A1W2PPK0 400 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 ASPDHA6ND91 283 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 O00370 1275 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 TTI1O43156 1089 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 DDHD2O94830 711 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 MOCS2O96007 188 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 ACAA1P09110 424 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 CDK4P11802 303 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 PSMB4P28070 264 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 NR2C2P49116 596 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 CLDN15P56746 228 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 FOLH1Q04609 750 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 CACNG1Q06432 222 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 ARHGAP1Q07960 439 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 ZBTB17Q13105 803 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 SF3B4Q15427 424 aaKnown RBP eCLIP4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 LBHQ53QV2 105 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 CYB5D1Q6P9G0 228 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 PIGWQ7Z7B1 504 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 PEX5LQ8IYB4 626 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms