RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 HALP42357 657 aa10.41□□□□□ -0.74
CLIP4-204ENST00000404424 MASP1P48740 699 aa10.41□□□□□ -0.74
CLIP4-204ENST00000404424 WNT3P56703 355 aa10.41□□□□□ -0.74
CLIP4-204ENST00000404424 PTSQ03393 145 aa10.41□□□□□ -0.74
CLIP4-204ENST00000404424 NPRL3Q12980 569 aa10.41□□□□□ -0.74
CLIP4-204ENST00000404424 HIST2H2ACQ16777 129 aaPredicted RBP10.41□□□□□ -0.74
CLIP4-204ENST00000404424 FAHD1Q6P587 224 aa10.41□□□□□ -0.74
CLIP4-204ENST00000404424 ZNF621Q6ZSS3 439 aa10.41□□□□□ -0.74
CLIP4-204ENST00000404424 PTOV1Q86YD1 416 aa10.41□□□□□ -0.74
CLIP4-204ENST00000404424 ATG16L2Q8NAA4 619 aa10.41□□□□□ -0.74
CLIP4-204ENST00000404424 NDNFQ8TB73 568 aa10.41□□□□□ -0.74
CLIP4-204ENST00000404424 ZFP90Q8TF47 636 aa10.41□□□□□ -0.74
CLIP4-204ENST00000404424 SKA2Q8WVK7 121 aaPredicted RBP10.41□□□□□ -0.74
CLIP4-204ENST00000404424 FCGR1BQ92637 280 aa10.41□□□□□ -0.74
CLIP4-204ENST00000404424 ECHDC3Q96DC8 303 aa10.41□□□□□ -0.74
CLIP4-204ENST00000404424 IGSF21Q96ID5 467 aa10.41□□□□□ -0.74
CLIP4-204ENST00000404424 HSH2DQ96JZ2 352 aa10.41□□□□□ -0.74
CLIP4-204ENST00000404424 EPYCQ99645 322 aa10.41□□□□□ -0.74
CLIP4-204ENST00000404424 CEP44Q9C0F1 390 aa10.41□□□□□ -0.74
CLIP4-204ENST00000404424 RNF186Q9NXI6 227 aa10.41□□□□□ -0.74
CLIP4-204ENST00000404424 CORO2BQ9UQ03 480 aa10.41□□□□□ -0.74
CLIP4-204ENST00000404424 RUVBL1Q9Y265 456 aaKnown RBP10.41□□□□□ -0.74
CLIP4-204ENST00000404424 PCDHB11Q9Y5F2 797 aa10.41□□□□□ -0.74
CLIP4-204ENST00000404424 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.4□□□□□ -0.74
CLIP4-204ENST00000404424 KRBA1A5PL33 1030 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 TMEM221A6NGB7 291 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 AXIN1O15169 862 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 MAN1A2O60476 641 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 ALDH1A1P00352 501 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 C9P02748 559 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 COX7A2P14406 83 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 VBP1P61758 197 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 LMAN2Q12907 356 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 CHIT1Q13231 466 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 LAPTM4AQ15012 233 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 INAQ16352 499 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 MPPE1Q53F39 396 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 DGKKQ5KSL6 1271 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 LAIR1Q6GTX8 287 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 CCDC81Q6ZN84 652 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 BTLAQ7Z6A9 289 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 SYNPOQ8N3V7 929 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 CPXM2Q8N436 756 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 MFSD4AQ8N468 514 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 ARL14EPQ8N8R7 260 aaPredicted RBP10.4□□□□□ -0.74
CLIP4-204ENST00000404424 FIBINQ8TAL6 211 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 BHMTQ93088 406 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 PYCR2Q96C36 320 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 SIGLEC11Q96RL6 698 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 MCCC1Q96RQ3 725 aaPredicted RBP10.4□□□□□ -0.74
CLIP4-204ENST00000404424 SLC22A12Q96S37 553 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 VN1R3Q9BXE9 311 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 SUV39H2Q9H5I1 410 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 ARMC7Q9H6L4 198 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 THUMPD1Q9NXG2 353 aaKnown RBP10.4□□□□□ -0.74
CLIP4-204ENST00000404424 VPS29Q9UBQ0 182 aa10.4□□□□□ -0.74
CLIP4-204ENST00000404424 OR2A25A4D2G3 310 aa10.4□□□□□ -0.75
CLIP4-204ENST00000404424 TOR1BO14657 336 aa10.4□□□□□ -0.75
CLIP4-204ENST00000404424 PRAMEF4O60810 478 aa10.4□□□□□ -0.75
CLIP4-204ENST00000404424 FADS2O95864 444 aaKnown RBP10.4□□□□□ -0.75
CLIP4-204ENST00000404424 SOD2P04179 222 aa10.4□□□□□ -0.75
CLIP4-204ENST00000404424 BMP1P13497 986 aa10.4□□□□□ -0.75
CLIP4-204ENST00000404424 HSD3B1P14060 373 aa10.4□□□□□ -0.75
CLIP4-204ENST00000404424 ATP1B2P14415 290 aaPredicted RBP10.4□□□□□ -0.75
CLIP4-204ENST00000404424 HSD3B2P26439 372 aa10.4□□□□□ -0.75
CLIP4-204ENST00000404424 EPHB3P54753 998 aa10.4□□□□□ -0.75
CLIP4-204ENST00000404424 RPS3AP61247 264 aaKnown RBP10.4□□□□□ -0.75
CLIP4-204ENST00000404424 RPP38P78345 283 aaKnown RBP10.4□□□□□ -0.75
CLIP4-204ENST00000404424 ZXDBP98169 803 aa10.4□□□□□ -0.75
CLIP4-204ENST00000404424 PAGE2BQ5JRK9 111 aa10.4□□□□□ -0.75
CLIP4-204ENST00000404424 UBE2UQ5VVX9 321 aa10.4□□□□□ -0.75
CLIP4-204ENST00000404424 PRAMEF9Q5VWM5 478 aa10.4□□□□□ -0.75
CLIP4-204ENST00000404424 VTCN1Q7Z7D3 282 aa10.4□□□□□ -0.75
CLIP4-204ENST00000404424 LGALS12Q96DT0 336 aa10.4□□□□□ -0.75
CLIP4-204ENST00000404424 P2RY13Q9BPV8 354 aa10.4□□□□□ -0.75
CLIP4-204ENST00000404424 PSD2Q9BQI7 771 aa10.4□□□□□ -0.75
CLIP4-204ENST00000404424 A0A1W2PQ67 120 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 MYO1DO94832 1006 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 DIRAS1O95057 198 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 TGM1P22735 817 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 KRT20P35900 424 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 PFN3P60673 137 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 TUBA1BP68363 451 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 IRF8Q02556 426 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 CAMK2GQ13555 558 aaPredicted RBP10.39□□□□□ -0.75
CLIP4-204ENST00000404424 DGCR6Q14129 220 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 TUBA1AQ71U36 451 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 SLC22A15Q8IZD6 547 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 VPS37AQ8NEZ2 397 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 WDR20Q8TBZ3 569 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 HRASLS5Q96KN8 279 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 EBPLQ9BY08 206 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 GABARAPL3Q9BY60 117 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 CPEB1Q9BZB8 566 aaKnown RBP10.39□□□□□ -0.75
CLIP4-204ENST00000404424 TPT1P8Q9HAU6 139 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 SPATA6Q9NWH7 488 aaPredicted RBP10.39□□□□□ -0.75
CLIP4-204ENST00000404424 ADPRHL2Q9NX46 363 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 BTNL2Q9UIR0 455 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 PADI2Q9Y2J8 665 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 PCDHGB3Q9Y5G1 929 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms