RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 SOWAHCQ53LP3 525 aaPredicted RBP16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 DSG4Q86SJ6 1040 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 ADCK1Q86TW2 530 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 PIK3C3Q8NEB9 887 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 OR5AK3PQ8NH89 298 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 FAR1Q8WVX9 515 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 CCDC115Q96NT0 180 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 ZDHHC3Q9NYG2 299 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 GNG14A0A1W2PPG7 69 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 ERN1O75460 977 aaKnown RBP16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 SULT1C4O75897 302 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 ARHGDIAP52565 204 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 UGT8Q16880 541 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 MACC1Q6ZN28 852 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 TMEM25Q86YD3 366 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 YTHDF1Q9BYJ9 559 aaKnown RBP16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 SUV39H2Q9H5I1 410 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 SIAEQ9HAT2 523 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 HMX1Q9NP08 348 aaPredicted RBP16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 MRPL17Q9NRX2 175 aaKnown RBP16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 KRT84Q9NSB2 600 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 GIN1Q9NXP7 522 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 ACSL6Q9UKU0 697 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 A0A0C4DFX4 3053 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 A0A096LPI6 279 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 KPNA4O00629 521 aaPredicted RBP16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 OR56A5P0C7T3 313 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 C21orf33P30042 268 aaPredicted RBP16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 MASP1P48740 699 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 TPTEP56180 551 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.5■□□□□ 0.231e-10■□□□□ 11
SNRNP70-202ENST00000401730 SVOPLQ8N434 492 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 C2orf15Q8WU43 125 aaKnown RBP16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 PROX1Q92786 737 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 SAMD11Q96NU1 681 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 MRPL9Q9BYD2 267 aaKnown RBP16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 HCFC1R1Q9NWW0 138 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 POU2F3Q9UKI9 436 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 INSL5Q9Y5Q6 135 aa16.5■□□□□ 0.23
SNRNP70-202ENST00000401730 SCN5AQ14524 2016 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 GREM1O60565 184 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 EPN2O95208 641 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 PTPN6P29350 595 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 CREMQ03060 361 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 GRSF1Q12849 480 aaKnown RBP eCLIP16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 GBX1Q14549 363 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 CTF1Q16619 201 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 SLC44A2Q8IWA5 706 aaPredicted RBP16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 CHPFQ8IZ52 775 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 C1orf52Q8N6N3 182 aaKnown RBP16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 SH3YL1Q96HL8 342 aaPredicted RBP16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 NRTNQ99748 197 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 NDEL1Q9GZM8 345 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 ITM2CQ9NQX7 267 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 LSM7Q9UK45 103 aaKnown RBP16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 TRBV5-3A0A0A0MS03 114 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 MAGEB17A8MXT2 336 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 NDUFB5O43674 189 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 AMD1P17707 334 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 RPS3P23396 243 aaKnown RBP eCLIP16.49■□□□□ 0.234e-7■■■□□ 16.2
SNRNP70-202ENST00000401730 CRATP43155 626 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 MRPL19P49406 292 aaKnown RBP16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 ACSM2AQ08AH3 577 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 ATG9BQ674R7 924 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 ACSM2BQ68CK6 577 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 ASTLQ6HA08 431 aaPredicted RBP16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 PAGE2Q7Z2X7 111 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 CADM3Q8N126 398 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 AADATQ8N5Z0 425 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 TMEM184CQ9NVA4 438 aa16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 KIAA0100Q14667 2235 aaKnown RBP16.49■□□□□ 0.23
SNRNP70-202ENST00000401730 KCNK5O95279 499 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 FABP3P05413 133 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 HSMCR30P0CW71 290 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 CD9P21926 228 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 KDELR2P33947 212 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 GZMMP51124 257 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 ILF2Q12905 390 aaKnown RBP16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 MFSD4BQ5TF39 518 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 ZNF852Q6ZMS4 543 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 TPRG1Q6ZUI0 275 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 HIPK1Q86Z02 1210 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 NLGN4XQ8N0W4 816 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 HTRA1Q92743 480 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 MUL1Q969V5 352 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 TUBA1CQ9BQE3 449 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 RNF167Q9H6Y7 350 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 DNAJC11Q9NVH1 559 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 KIAA1522Q9P206 1035 aaPredicted RBP16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 PCDHGA10Q9Y5H3 936 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 TEX28O15482 410 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 C1SP09871 688 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 PSMA3P25788 255 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 HPCAL1P37235 193 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 MC1RQ01726 317 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 VMACQ2NL98 169 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 USP45Q70EL2 814 aa16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 UTP15Q8TED0 518 aaKnown RBP16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 TRUB1Q8WWH5 349 aaKnown RBP16.48■□□□□ 0.23
SNRNP70-202ENST00000401730 NELL1Q92832 810 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms