RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 FKBP9O95302 570 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 CTSBP07858 339 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 HGFP14210 728 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 EPB42P16452 691 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 CD22P20273 847 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 VARSP26640 1264 aaKnown RBP15.3■□□□□ 0.04
HMGA1-204ENST00000401473 GABRA4P48169 554 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 SERPINB4P48594 390 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 DNAJB13P59910 316 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 LIPMQ5VYY2 423 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 CES4AQ5XG92 561 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 NXPE4Q6UWF7 544 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 PAQR7Q86WK9 346 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 GALNT15Q8N3T1 639 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 SNX31Q8N9S9 440 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 OR52B6Q8NGF0 335 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 ZNF483Q8TF39 744 aaPredicted RBP15.3■□□□□ 0.04
HMGA1-204ENST00000401473 CCDC126Q96EE4 140 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 TCTN2Q96GX1 697 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 NOL11Q9H8H0 719 aaKnown RBP15.3■□□□□ 0.04
HMGA1-204ENST00000401473 SEMA4BQ9NPR2 832 aaPredicted RBP15.3■□□□□ 0.04
HMGA1-204ENST00000401473 TMEM184CQ9NVA4 438 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 ZNF225Q9UK10 706 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 PILRAQ9UKJ1 303 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 FEZF1A0PJY2 475 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 HGSO14964 777 aaPredicted RBP15.29■□□□□ 0.04
HMGA1-204ENST00000401473 TRIM13O60858 407 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 EBLN1P0CF75 366 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 FGF3P11487 239 aaPredicted RBP15.29■□□□□ 0.04
HMGA1-204ENST00000401473 CSTF2P33240 577 aaKnown RBP eCLIP15.29■□□□□ 0.04
HMGA1-204ENST00000401473 CCR10P46092 362 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 FAM219BQ5XKK7 198 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 ATG14Q6ZNE5 492 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 TMPRSS11BQ86T26 416 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 KMT5CQ86Y97 462 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 DNAJC22Q8N4W6 341 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 BMPERQ8N8U9 685 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 OR6Y1Q8NGX8 325 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 MGARPQ8TDB4 240 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 PRR11Q96HE9 360 aaPredicted RBP15.29■□□□□ 0.04
HMGA1-204ENST00000401473 CDK15Q96Q40 435 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 SELENOSQ9BQE4 189 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 GATA5Q9BWX5 397 aaPredicted RBP15.29■□□□□ 0.04
HMGA1-204ENST00000401473 GSTO2Q9H4Y5 243 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 PDE7BQ9NP56 450 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 SOHLH2Q9NX45 425 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 SIDT1Q9NXL6 827 aaKnown RBP15.29■□□□□ 0.04
HMGA1-204ENST00000401473 GPRC5BQ9NZH0 403 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 SNX7Q9UNH6 387 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 DYRK1BQ9Y463 629 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 H3BQF6 201 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 HAT1O14929 419 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 CCNDBP1O95273 360 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 C1GALT1C1LP0DN25 315 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 ITIH1P19827 911 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 CLCQ05315 142 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 PCDH1Q08174 1060 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 CAMK2BQ13554 666 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 DOC2AQ14183 400 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 E2F2Q14209 437 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 DEFB110Q30KQ9 67 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 ZCCHC23Q6ZST2 131 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 RAB11FIP2Q7L804 512 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 ADCK2Q7Z695 626 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 CCNYL1Q8N7R7 359 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 AGBL5Q8NDL9 886 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 TRPC4APQ8TEL6 797 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 LIN37Q96GY3 246 aaPredicted RBP15.29■□□□□ 0.04
HMGA1-204ENST00000401473 CMKLR1Q99788 373 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 CHRNA10Q9GZZ6 450 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 MID2Q9UJV3 735 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 ANGPTL3Q9Y5C1 460 aa15.29■□□□□ 0.04
HMGA1-204ENST00000401473 UBFD1O14562 309 aaKnown RBP15.28■□□□□ 0.04
HMGA1-204ENST00000401473 CCR8P51685 355 aa15.28■□□□□ 0.04
HMGA1-204ENST00000401473 CHIT1Q13231 466 aa15.28■□□□□ 0.04
HMGA1-204ENST00000401473 COL9A2Q14055 689 aaPredicted RBP15.28■□□□□ 0.04
HMGA1-204ENST00000401473 XKR6Q5GH73 641 aa15.28■□□□□ 0.04
HMGA1-204ENST00000401473 ATG9BQ674R7 924 aa15.28■□□□□ 0.04
HMGA1-204ENST00000401473 FRMPD2BQ6IN97 320 aa15.28■□□□□ 0.04
HMGA1-204ENST00000401473 NUDCD3Q8IVD9 361 aa15.28■□□□□ 0.04
HMGA1-204ENST00000401473 OR2A5Q96R48 311 aa15.28■□□□□ 0.04
HMGA1-204ENST00000401473 PAIP2Q9BPZ3 127 aaKnown RBP15.28■□□□□ 0.04
HMGA1-204ENST00000401473 CAPS2Q9BXY5 557 aa15.28■□□□□ 0.04
HMGA1-204ENST00000401473 APMAPQ9HDC9 416 aa15.28■□□□□ 0.04
HMGA1-204ENST00000401473 GEMIN8Q9NWZ8 242 aaKnown RBP15.28■□□□□ 0.04
HMGA1-204ENST00000401473 LOC105369274A0A096LPK9 316 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 LOC102723532A0A0G2JNH3 316 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 A0A0J9YVX5 310 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 EFCAB7A8K855 629 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 TMX2-CTNND1H3BSU7 103 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 KATNA1O75449 491 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 HRH2P25021 359 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 ARRB2P32121 409 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 ETV5P41161 510 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 CASP2P42575 452 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 ARL4DP49703 201 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 IRF8Q02556 426 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 GPR19Q15760 415 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 OR4N4Q8N0Y3 316 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 PPP4R1Q8TF05 950 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms