RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 EIF3IQ13347 325 aaKnown RBP11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 TUBB3Q13509 450 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 RTP5Q14D33 572 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PDK4Q16654 411 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 UNC50Q53HI1 259 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ZNF678Q5SXM1 525 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 AGBL2Q5U5Z8 902 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 FRMPD2BQ6IN97 320 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 GOLGA7Q7Z5G4 137 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ZNF740Q8NDX6 193 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ARMC2Q8NEN0 867 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 OR1L3Q8NH93 324 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ZNF483Q8TF39 744 aaPredicted RBP11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SLC5A11Q8WWX8 675 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ZNF285Q96NJ3 590 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 FAM111AQ96PZ2 611 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 OR6C1Q96RD1 312 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 RUFY1Q96T51 708 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CTRCQ99895 268 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 NRSN2Q9GZP1 204 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 POLR1BQ9H9Y6 1135 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PDE7BQ9NP56 450 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ASCL3Q9NQ33 180 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 FGF21Q9NSA1 209 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 TMEM184CQ9NVA4 438 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 COPG2Q9UBF2 871 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 OPTCQ9UBM4 332 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CEP295Q9C0D2 2601 aa11.9□□□□□ -0.51
HLA-DQB1-203ENST00000399082 LOC105369274A0A096LPK9 316 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 LOC102723532A0A0G2JNH3 316 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 FEZF1A0PJY2 475 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TRABD2BA6NFA1 517 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 CDRT15L2A8MXV6 281 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 PPP6CO00743 305 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 OR7A17O14581 309 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 PRPF4O43172 522 aaKnown RBP eCLIP11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 LCMT2O60294 686 aaKnown RBP11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 FGF5P12034 268 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 BCL6P41182 706 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 GCGRP47871 477 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 MAPK10P53779 464 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 PRKAA2P54646 552 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 MAGOHP61326 146 aaKnown RBP11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 REEP5Q00765 189 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 PCDH1Q08174 1060 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 COL9A2Q14055 689 aaPredicted RBP11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 PRAMEF17Q5VTA0 474 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 METTL2BQ6P1Q9 378 aaKnown RBP11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 FOXR1Q6PIV2 292 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 IGF2-ASQ6U949 168 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 NXPE4Q6UWF7 544 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ERMP1Q7Z2K6 904 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 VN1R4Q7Z5H5 301 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TMPRSS11BQ86T26 416 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 OR4N4Q8N0Y3 316 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TEX9Q8N6V9 391 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 SNX31Q8N9S9 440 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 RDH11Q8TC12 318 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 RNF31Q96EP0 1072 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 WDR34Q96EX3 536 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 OR2A5Q96R48 311 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 MECRQ9BV79 373 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 SARGQ9BW04 601 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 GSTO2Q9H4Y5 243 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 PELI2Q9HAT8 420 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 FBXO8Q9NRD0 319 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ENAMQ9NRM1 1142 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 GEMIN8Q9NWZ8 242 aaKnown RBP11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 GPRC5BQ9NZH0 403 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 FOXJ2Q9P0K8 574 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TMCO1Q9UM00 188 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 SNX7Q9UNH6 387 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 DYRK1BQ9Y463 629 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 B3GALT1Q9Y5Z6 326 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 KCNE2Q9Y6J6 123 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 SDK2Q58EX2 2172 aa11.89□□□□□ -0.51
HLA-DQB1-203ENST00000399082 FER1L5A0AVI2 2057 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 FRYQ5TBA9 3013 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 A0A0J9YVX5 310 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TMEM150CB9EJG8 249 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 P2RX6O15547 441 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 BRINP1O60477 761 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 WFS1O76024 890 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 DXOO77932 396 aaKnown RBP11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TNFSF15O95150 251 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 CAPNS1P04632 268 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 JMJD7P0C870 316 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 DHRS4L1P0CG22 281 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 C1GALT1C1LP0DN25 315 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 MYL2P10916 166 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 CPA3P15088 417 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ZNF28P17035 718 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 GNAZP19086 355 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TAC1P20366 129 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 HRH2P25021 359 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 CASP2P42575 452 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ARL4DP49703 201 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 HERVK_113P63132 956 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ACY1Q03154 408 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 RELAQ04206 551 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms