RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 BEST2Q8NFU1 509 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 OR5H6Q8NGV6 325 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 ST8SIA4Q92187 359 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 EXOSC8Q96B26 276 aaKnown RBP6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 CMTM5Q96DZ9 223 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 NECAB3Q96P71 396 aaPredicted RBP6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 INTS14Q96SY0 518 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 PCED1AQ9H1Q7 454 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 FAM25AB3EWG3 89 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 FAM25CB3EWG5 89 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 FAM25GB3EWG6 89 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 GPR25O00155 361 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 ARNTLO00327 626 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 PRODHO43272 600 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 HSPA12AO43301 675 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 COCHO43405 550 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 GLRA3O75311 464 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 MED6O75586 246 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 AHSA1O95433 338 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 PGK1P00558 417 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 MMP2P08253 660 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 ANXA5P08758 320 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 CD48P09326 243 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 PRF1P14222 555 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 PRKCHP24723 683 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 PTAFRP25105 342 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 GIFP27352 417 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 PTPN6P29350 595 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 CEBPDP49716 269 aaPredicted RBP6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 TPMTP51580 245 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 GALK2Q01415 458 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 CAPSQ13938 189 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 VEZF1Q14119 521 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 ESCO2Q56NI9 601 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 FBXO47Q5MNV8 452 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 MROH9Q5TGP6 573 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 SULT1C3Q6IMI6 304 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 TRAF7Q6Q0C0 670 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 LRRC8DQ7L1W4 858 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 OVCH2Q7RTZ1 564 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 IGDCC3Q8IVU1 814 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 ARMC10Q8N2F6 343 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 WDTC1Q8N5D0 677 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 OR6J1Q8NGC5 347 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 KLHL6Q8WZ60 621 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 PRR11Q96HE9 360 aaPredicted RBP6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 RNF157Q96PX1 679 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 HAPLN2Q9GZV7 340 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 ELP3Q9H9T3 547 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 ANKMY1Q9P2S6 941 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 SLC27A5Q9Y2P5 690 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 STARD10Q9Y365 291 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 C2orf92A0A1B0GVN3 265 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 AGAP14A8MT82 685 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 KPNA4O00629 521 aaPredicted RBP6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 LRRTM2O43300 516 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 PDGFBP01127 241 aaPredicted RBP6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 CLEC3BP05452 202 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 MAGP20916 626 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 EIF2DP41214 584 aaKnown RBP6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 TNFSF9P41273 254 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 DGKQP52824 942 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 PUDPQ08623 228 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 CDH17Q12864 832 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 FGL2Q14314 439 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 CDO1Q16878 200 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 MOGAT2Q3SYC2 334 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 PRAMEF18Q5VWM3 479 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 BSPRYQ5W0U4 402 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 MPZL3Q6UWV2 235 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 ACAD11Q709F0 780 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 SLC26A9Q7LBE3 791 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 DHDDSQ86SQ9 333 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 PPP1R3BQ86XI6 285 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 GID4Q8IVV7 300 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 SELENOHQ8IZQ5 122 aaKnown RBP6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 C1orf52Q8N6N3 182 aaKnown RBP6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 IL17RCQ8NAC3 791 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 TMEM145Q8NBT3 493 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 CPXM1Q96SM3 734 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 WDR83Q9BRX9 315 aaKnown RBP6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 MECRQ9BV79 373 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 SMYD3Q9H7B4 428 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 PCDHB16Q9NRJ7 776 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 COLQQ9Y215 455 aaPredicted RBP6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 AP4B1Q9Y6B7 739 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 DOCK3Q8IZD9 2030 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 GBF1Q92538 1859 aa6.4□□□□□ -1.38
TM9SF4-202ENST00000398022 NPIPA2E9PIF3 369 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 SLC22A2O15244 555 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 PROS1P07225 676 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 ARAFP10398 606 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 SAGP10523 405 aaPredicted RBP6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 AOC1P19801 751 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 SDC4P31431 198 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 ASPAP45381 313 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 AGFG1P52594 562 aaKnown RBP6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 CLDN8P56748 225 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 ERVK-8P63133 956 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 SRSF5Q13243 272 aaKnown RBP6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms