RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 LCMT1Q9UIC8 334 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 SATB2Q9UPW6 733 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 VWA7Q9Y334 891 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 CCDC7Q96M83 1385 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 SF3B1O75533 1304 aaKnown RBP eCLIP6.51□□□□□ -1.37
SMCO1-201ENST00000397537 CCDC171Q6TFL3 1326 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 PIPSLA2A3N6 862 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 HEATR9A2RTY3 570 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 IQCF5A8MTL0 148 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 H0YGN5 161 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 SRGAP3O43295 1099 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 VPREB1P12018 145 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 GLB1P16278 677 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 EEF1B2P24534 225 aaKnown RBP6.51□□□□□ -1.37
SMCO1-201ENST00000397537 GSTM2P28161 218 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 PPIFP30405 207 aaKnown RBP6.51□□□□□ -1.37
SMCO1-201ENST00000397537 HOXC9P31274 260 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 ADRA1AP35348 466 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 KCNQ1P51787 676 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 POLR2LP62875 67 aaKnown RBP6.51□□□□□ -1.37
SMCO1-201ENST00000397537 SPOCK1Q08629 439 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 NCBP1Q09161 790 aaKnown RBP6.51□□□□□ -1.37
SMCO1-201ENST00000397537 ASPHQ12797 758 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 STXBP2Q15833 593 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 TBR1Q16650 682 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 FAM83EQ2M2I3 478 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 FAM98BQ52LJ0 330 aaKnown RBP6.51□□□□□ -1.37
SMCO1-201ENST00000397537 PLEKHO1Q53GL0 409 aaPredicted RBP6.51□□□□□ -1.37
SMCO1-201ENST00000397537 PRSS55Q6UWB4 352 aaPredicted RBP6.51□□□□□ -1.37
SMCO1-201ENST00000397537 RHOUQ7L0Q8 258 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 PHLDB2Q86SQ0 1253 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 YRDCQ86U90 279 aaKnown RBP6.51□□□□□ -1.37
SMCO1-201ENST00000397537 TMEM173Q86WV6 379 aaPredicted RBP6.51□□□□□ -1.37
SMCO1-201ENST00000397537 UBE2J2Q8N2K1 259 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 CERS5Q8N5B7 392 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 DNAAF3Q8N9W5 541 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 OR9K2Q8NGE7 335 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 OR8K1Q8NGG5 319 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 WIPF2Q8TF74 440 aaPredicted RBP6.51□□□□□ -1.37
SMCO1-201ENST00000397537 PIGKQ92643 395 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 OSTF1Q92882 214 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 MOAP1Q96BY2 351 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 ORAI1Q96D31 301 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 NPY6RQ99463 290 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 ALKBH7Q9BT30 221 aaPredicted RBP6.51□□□□□ -1.37
SMCO1-201ENST00000397537 CALHM2Q9HA72 323 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 SLC28A3Q9HAS3 691 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 NEK6Q9HC98 313 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 ENTPD7Q9NQZ7 604 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 TMEM248Q9NWD8 314 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 PDP1Q9P0J1 537 aaPredicted RBP6.51□□□□□ -1.37
SMCO1-201ENST00000397537 PACSIN2Q9UNF0 486 aaPredicted RBP6.51□□□□□ -1.37
SMCO1-201ENST00000397537 FAM96BQ9Y3D0 163 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 UTYO14607 1347 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 ZNF541Q9H0D2 1346 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 KDM6AO15550 1401 aaPredicted RBP6.51□□□□□ -1.37
SMCO1-201ENST00000397537 THSD7BQ9C0I4 1608 aa6.51□□□□□ -1.37
SMCO1-201ENST00000397537 PRR23D1E9PI22 279 aaPredicted RBP6.5□□□□□ -1.37
SMCO1-201ENST00000397537 PSMD11O00231 422 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 LSM1O15116 133 aaKnown RBP6.5□□□□□ -1.37
SMCO1-201ENST00000397537 HDAC3O15379 428 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 SULT1B1O43704 296 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 CBX6O95503 412 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 CLPTM1O96005 669 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 ERBB2P04626 1255 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 HIST1H2ABP04908 130 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 ICAM1P05362 532 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 PRR23D2P0DMB1 279 aaPredicted RBP6.5□□□□□ -1.37
SMCO1-201ENST00000397537 HIST1H2ADP20671 130 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 SLC1A6P48664 564 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 RGS4P49798 205 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 GZMKP49863 264 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 RPL23AP62750 156 aaKnown RBP6.5□□□□□ -1.37
SMCO1-201ENST00000397537 PIGFQ07326 219 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 FUT7Q11130 342 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 CUL3Q13618 768 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 KRT33BQ14525 404 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 MVPQ14764 893 aaKnown RBP6.5□□□□□ -1.37
SMCO1-201ENST00000397537 PAOXQ6QHF9 649 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 SCARA5Q6ZMJ2 495 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 Q6ZS46 218 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 BZW1Q7L1Q6 419 aaKnown RBP6.5□□□□□ -1.37
SMCO1-201ENST00000397537 HIST3H2AQ7L7L0 130 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 C1orf210Q8IVY1 113 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 ITPRIPQ8IWB1 547 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 UBQLNLQ8IYU4 475 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 IZUMO1Q8IYV9 350 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 MAB21L3Q8N8X9 362 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 SPATA4Q8NEY3 305 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 MAIP1Q8WWC4 291 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 BTBD6Q96KE9 485 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 CPNE1Q99829 537 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 MRPL13Q9BYD1 178 aaKnown RBP6.5□□□□□ -1.37
SMCO1-201ENST00000397537 CEP41Q9BYV8 373 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 ZFP14Q9HCL3 533 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 HHATLQ9HCP6 504 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 COPG2Q9UBF2 871 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 SERTAD3Q9UJW9 196 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 PCDHA12Q9UN75 941 aa6.5□□□□□ -1.37
SMCO1-201ENST00000397537 PKP3Q9Y446 797 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms