RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 GEMIN8Q9NWZ8 242 aaKnown RBP22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 FTSJ1Q9UET6 329 aa22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 APOBEC2Q9Y235 224 aaKnown RBP22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 TSC22D4Q9Y3Q8 395 aa22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 DNAJC15Q9Y5T4 150 aa22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 U3KQA8 63 aa22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 COL5A1P20908 1838 aaPredicted RBP22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 A0A1B0GTL3 188 aa22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 CPED1A4D0V7 1026 aa22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 NDUFAB1O14561 156 aa22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 PRAMEF4O60810 478 aa22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 ULK1O75385 1050 aa22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 VARSP26640 1264 aaKnown RBP22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 INHBCP55103 352 aa22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 FOXA1P55317 472 aa22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 SQSTM1Q13501 440 aa22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 PRAMEF9Q5VWM5 478 aa22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 FRG2Q64ET8 278 aa22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 GUSBP11Q6P575 273 aa22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 BCAS4Q8TDM0 211 aa22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 RHBDD1Q8TEB9 315 aa22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 CNDP2Q96KP4 475 aaKnown RBP22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 FRG2BQ96QU4 278 aa22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 KCNA7Q96RP8 456 aa22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 ELAC2Q9BQ52 826 aaKnown RBP22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 DPH7Q9BTV6 452 aa22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 TNFRSF12AQ9NP84 129 aa22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 CUEDC1Q9NWM3 386 aaPredicted RBP22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 SH2B3Q9UQQ2 575 aa22.66■■□□□ 1.22
TSPAN4-202ENST00000397396 TLCD2A6NGC4 264 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 TMEM233B4DJY2 109 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 H7BY64 318 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 TNFSF14O43557 240 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 SNX3O60493 162 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 VPS4BO75351 444 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 CKMT2P17540 419 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 CD22P20273 847 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 AQP5P55064 265 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 OR1D5P58170 312 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 CSNK1G2P78368 415 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 RELAQ04206 551 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 PDCD2Q16342 344 aaPredicted RBP22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 UGT3A2Q3SY77 523 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 KIAA1614Q5VZ46 1190 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 CGB2Q6NT52 195 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 IRGCQ6NXR0 463 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 TMIGD1Q6UXZ0 262 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 LAS2Q8IYD9 372 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 NCSTNQ92542 709 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 C19orf60Q96EN9 201 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 PRAP1Q96NZ9 151 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 PLCD4Q9BRC7 762 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 SARGQ9BW04 601 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 SLC6A20Q9NP91 592 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 C1GALT1Q9NS00 363 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 RIC8BQ9NVN3 520 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 BTBD3Q9Y2F9 522 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 TIMM22Q9Y584 194 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 USP34Q70CQ2 3546 aa22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 ARID1BQ8NFD5 2236 aaPredicted RBP22.65■■□□□ 1.22
TSPAN4-202ENST00000397396 TRBC2A0A5B9 178 aa22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 SERTM1A2A2V5 107 aa22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 MANBAO00462 879 aa22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 SKAP2O75563 359 aaPredicted RBP22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 GP1BAP07359 652 aa22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 HSD3B1P14060 373 aa22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 EZRP15311 586 aaKnown RBP22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 CDH3P22223 829 aa22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 HSD3B2P26439 372 aa22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 GRIA3P42263 894 aa22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 ARFIP2P53365 341 aa22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 ZNF425Q6IV72 752 aa22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 WDR74Q6RFH5 385 aaPredicted RBP22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 ACAD11Q709F0 780 aa22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 NAXDQ8IW45 347 aa22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 DDIASQ8IXT1 998 aa22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 GBP7Q8N8V2 638 aaPredicted RBP22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 Q8N9G6 341 aaPredicted RBP22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 WDR48Q8TAF3 677 aa22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 SELENOMQ8WWX9 145 aa22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 USP7Q93009 1102 aa22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 NUF2Q9BZD4 464 aa22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 ABCG4Q9H172 646 aa22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 SEMA6CQ9H3T2 930 aa22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 MEAF6Q9HAF1 191 aa22.64■■□□□ 1.22
TSPAN4-202ENST00000397396 PCM1Q15154 2024 aa22.64■■□□□ 1.21
TSPAN4-202ENST00000397396 A0A0G2JND7 137 aa22.63■■□□□ 1.21
TSPAN4-202ENST00000397396 OR2A25A4D2G3 310 aa22.63■■□□□ 1.21
TSPAN4-202ENST00000397396 SLC28A1O00337 649 aa22.63■■□□□ 1.21
TSPAN4-202ENST00000397396 FFAR3O14843 346 aa22.63■■□□□ 1.21
TSPAN4-202ENST00000397396 CAPN5O15484 640 aaPredicted RBP22.63■■□□□ 1.21
TSPAN4-202ENST00000397396 GPR42O15529 346 aa22.63■■□□□ 1.21
TSPAN4-202ENST00000397396 MAP3K7O43318 606 aa22.63■■□□□ 1.21
TSPAN4-202ENST00000397396 CD59P13987 128 aa22.63■■□□□ 1.21
TSPAN4-202ENST00000397396 RPS15AP62244 130 aaKnown RBP22.63■■□□□ 1.21
TSPAN4-202ENST00000397396 BTKQ06187 659 aa22.63■■□□□ 1.21
TSPAN4-202ENST00000397396 CSTF3Q12996 717 aaKnown RBP22.63■■□□□ 1.21
TSPAN4-202ENST00000397396 PIGWQ7Z7B1 504 aa22.63■■□□□ 1.21
TSPAN4-202ENST00000397396 PAQR7Q86WK9 346 aa22.63■■□□□ 1.21
TSPAN4-202ENST00000397396 OR7G3Q8NG95 312 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms