RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 OR2A14Q96R47 310 aa23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 PHOX2BQ99453 314 aa23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 CPPED1Q9BRF8 314 aaPredicted RBP23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 SLA2Q9H6Q3 261 aa23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 LRTM1Q9HBL6 345 aa23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 TLR8Q9NR97 1041 aaKnown RBP23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 GPRC5BQ9NZH0 403 aa23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 PSORS1C1Q9UIG5 152 aa23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 PCDHB8Q9UN66 801 aa23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 SAMD4AQ9UPU9 718 aaKnown RBP23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 SNX8Q9Y5X2 465 aa23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 CSNK2BP67870 215 aa23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 MORN1Q5T089 497 aa23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 ZNF438Q7Z4V0 828 aa23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 RAB43Q86YS6 212 aa23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 GLB1L3Q8NCI6 653 aaPredicted RBP23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 HCAR2Q8TDS4 363 aa23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 DPH2Q9BQC3 489 aaPredicted RBP23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 TM6SF2Q9BZW4 377 aa23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 CLPBQ9H078 707 aa23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 SIRT5Q9NXA8 310 aa23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 RGS14O43566 566 aa23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 Q5BKY6 102 aa23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 CACHD1Q5VU97 1274 aa23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 ZNF551Q7Z340 670 aaPredicted RBP23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 CYP4Z2PQ8N1L4 340 aa23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 PITX2Q99697 317 aa23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 CCDC32Q9BV29 185 aa23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 GPR63Q9BZJ6 419 aa23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 CLMPQ9H6B4 373 aa23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 PRM3Q9NNZ6 103 aa23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 PCDHGA6Q9Y5G7 932 aa23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 GLUD1P00367 558 aa23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 SOX6P35712 828 aa23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 MAPKAPK2P49137 400 aa23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 ZXDBP98169 803 aa23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 DOK6Q6PKX4 331 aa23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 CADM2Q8N3J6 435 aa23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 JPH3Q8WXH2 748 aaPredicted RBP23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 MYDGFQ969H8 173 aa23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 TRIM63Q969Q1 353 aa23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 SLC30A2Q9BRI3 323 aa23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 GKN1Q9NS71 199 aa23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 ARIH1Q9Y4X5 557 aaPredicted RBP23.27■■□□□ 1.32
CSNK1E-203ENST00000396832 PLXNA4Q9HCM2 1894 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 ICMTO60725 284 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 GJB5O95377 273 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 PIK3CBP42338 1070 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 GNPDA1P46926 289 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 CRISP3P54108 245 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 GRPEL2Q8TAA5 225 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 POP5Q969H6 163 aaKnown RBP23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 RPRD1BQ9NQG5 326 aaKnown RBP23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 SH3BGRLO75368 114 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 HSMCR30P0CW71 290 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 BCKDHAP12694 445 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 TYMPP19971 482 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 GKP32189 559 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 VLDLRP98155 873 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 DUSP4Q13115 394 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 CAMK2GQ13555 558 aaPredicted RBP23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 ARMCX4Q5H9R4 360 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 WDR45BQ5MNZ6 344 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 GPR153Q6NV75 609 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 LYPD8Q6UX82 237 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 VN1R5Q7Z5H4 357 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 ADAMTSL2Q86TH1 951 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 SERINC5Q86VE9 423 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 C11orf74Q86VG3 221 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 PEX5LQ8IYB4 626 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 GGHQ92820 318 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 GDF15Q99988 308 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 EBPLQ9BY08 206 aa23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 FCF1Q9Y324 198 aaKnown RBP23.26■■□□□ 1.31
CSNK1E-203ENST00000396832 NT5C1B-RDH14C9J2C7 533 aa23.25■■□□□ 1.31
CSNK1E-203ENST00000396832 ERVH48-1M5A8F1 160 aa23.25■■□□□ 1.31
CSNK1E-203ENST00000396832 ARHGAP33O14559 1287 aa23.25■■□□□ 1.31
CSNK1E-203ENST00000396832 SLC25A14O95258 325 aaPredicted RBP23.25■■□□□ 1.31
CSNK1E-203ENST00000396832 CCNDBP1O95273 360 aa23.25■■□□□ 1.31
CSNK1E-203ENST00000396832 FABP3P05413 133 aa23.25■■□□□ 1.31
CSNK1E-203ENST00000396832 CDK1P06493 297 aa23.25■■□□□ 1.31
CSNK1E-203ENST00000396832 RHOCP08134 193 aa23.25■■□□□ 1.31
CSNK1E-203ENST00000396832 CYP4F2P78329 520 aa23.25■■□□□ 1.31
CSNK1E-203ENST00000396832 MGAT3Q09327 533 aa23.25■■□□□ 1.31
CSNK1E-203ENST00000396832 PCBP2Q15366 365 aaKnown RBP eCLIP23.25■■□□□ 1.311e-6■■■■■ 27.4
CSNK1E-203ENST00000396832 SPRYD7Q5W111 196 aa23.25■■□□□ 1.31
CSNK1E-203ENST00000396832 TMCO6Q96DC7 493 aa23.25■■□□□ 1.31
CSNK1E-203ENST00000396832 GIMAP4Q9NUV9 329 aa23.25■■□□□ 1.31
CSNK1E-203ENST00000396832 CYP7B1O75881 506 aa23.25■■□□□ 1.31
CSNK1E-203ENST00000396832 ENDOUP21128 410 aaKnown RBP23.25■■□□□ 1.31
CSNK1E-203ENST00000396832 RGS6P49758 472 aa23.25■■□□□ 1.31
CSNK1E-203ENST00000396832 REM2Q8IYK8 340 aaPredicted RBP23.25■■□□□ 1.31
CSNK1E-203ENST00000396832 TRPV1Q8NER1 839 aa23.25■■□□□ 1.31
CSNK1E-203ENST00000396832 ARPC5LQ9BPX5 153 aa23.25■■□□□ 1.31
CSNK1E-203ENST00000396832 CHD5Q8TDI0 1954 aa23.25■■□□□ 1.31
CSNK1E-203ENST00000396832 PRRC2BQ5JSZ5 2229 aaKnown RBP23.25■■□□□ 1.31
CSNK1E-203ENST00000396832 FAM25AB3EWG3 89 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 FAM25CB3EWG5 89 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 FAM25GB3EWG6 89 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 ERN1O75460 977 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms