RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 FAM205AQ6ZU69 1335 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 FLRT2O43155 660 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 C21orf2O43822 256 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 TCEA1P23193 301 aaKnown RBP13.1□□□□□ -0.31
USP49-203ENST00000394253 CMPK1P30085 196 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 IL23RQ5VWK5 629 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 GID4Q8IVV7 300 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 GLYATL2Q8WU03 294 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 TMEM80Q96HE8 168 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 KCNU1A8MYU2 1149 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 MMP10P09238 476 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 SREBF1P36956 1147 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 CLEC12AQ5QGZ9 265 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 ZNF367Q7RTV3 350 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 LRRC57Q8N9N7 239 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 P2RX2Q9UBL9 471 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.1□□□□□ -0.31
USP49-203ENST00000394253 OR6C74A6NCV1 312 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 GRXCR2A6NFK2 248 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 ASGR1P07306 291 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 SERINC3Q13530 473 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 CHRNA6Q15825 494 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 SUN3Q8TAQ9 357 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 NPLQ9BXD5 320 aaPredicted RBP13.1□□□□□ -0.31
USP49-203ENST00000394253 DNTTIP1Q9H147 329 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 PAQR5Q9NXK6 330 aaPredicted RBP13.1□□□□□ -0.31
USP49-203ENST00000394253 PRDM15P57071 1507 aaPredicted RBP13.1□□□□□ -0.31
USP49-203ENST00000394253 H2AFB2P0C5Z0 115 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 PPIGQ13427 754 aaKnown RBP eCLIP13.1□□□□□ -0.31
USP49-203ENST00000394253 PREBQ9HCU5 417 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 NYAP2Q9P242 653 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 MED12Q93074 2177 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 JUNP05412 331 aaKnown RBP13.1□□□□□ -0.31
USP49-203ENST00000394253 HCAR3P49019 387 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 DYRK1AQ13627 763 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 CTC1Q2NKJ3 1217 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 PRAMEF13Q5VWM6 474 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 ARHGAP11AQ6P4F7 1023 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 MARCH9Q86YJ5 346 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 SEMA3CQ99985 751 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 HACL1Q9UJ83 578 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 SNX10Q9Y5X0 201 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 FADS1O60427 444 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 CXCL8P10145 99 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 ZNF169Q14929 603 aaPredicted RBP13.09□□□□□ -0.31
USP49-203ENST00000394253 MLC1Q15049 377 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 C4orf17Q53FE4 359 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 KIAA1161Q6NSJ0 714 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 CERS6Q6ZMG9 384 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 NANSQ9NR45 359 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 RALGAPA1Q6GYQ0 2036 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 E9PI62 339 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 DNAJB6O75190 326 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 TAS2R20P59543 309 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 RNF4P78317 190 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 PSPHP78330 225 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 RHDQ02161 417 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 NADK2Q4G0N4 442 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 TMEM214Q6NUQ4 689 aaKnown RBP13.09□□□□□ -0.31
USP49-203ENST00000394253 ZFP82Q8N141 532 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 TGM7Q96PF1 710 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 SMCO4Q9NRQ5 59 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 IMP3Q9NV31 184 aaKnown RBP13.09□□□□□ -0.31
USP49-203ENST00000394253 A8MUI8 341 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 B3GALT2O43825 422 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 PNPP00491 289 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 VTNP04004 478 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 MC4RP32245 332 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 CDH15P55291 814 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 PAN2Q504Q3 1202 aaKnown RBP13.09□□□□□ -0.31
USP49-203ENST00000394253 COG8Q96MW5 612 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 CACNA1SQ13698 1873 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 PIKFYVEQ9Y2I7 2098 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 AQP12BA6NM10 295 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 RBBP9O75884 186 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 ASPAP45381 313 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 RIDAP52758 137 aaKnown RBP13.09□□□□□ -0.31
USP49-203ENST00000394253 SSX9Q7RTT3 188 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 TMEM145Q8NBT3 493 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 ERLEC1Q96DZ1 483 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 ABCG8Q9H221 673 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 NLRP1Q9C000 1473 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 INMT-MINDY4F8WBC2 141 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 CCNFP41002 786 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 MRPL49Q13405 166 aaKnown RBP13.09□□□□□ -0.31
USP49-203ENST00000394253 LILRB2Q8N423 598 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 RSC1A1Q92681 617 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 BARD1Q99728 777 aaKnown RBP13.09□□□□□ -0.31
USP49-203ENST00000394253 TBL1XR1Q9BZK7 514 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 OR51E2Q9H255 320 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 NLGN3Q9NZ94 848 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 WDR45Q9Y484 360 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 NCANO14594 1321 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 E5RJQ4 531 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 TLR4O00206 839 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 CD3GP09693 182 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 AMY2BP19961 511 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 BDKRB2P30411 391 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 DPP6P42658 865 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 GPX6P59796 221 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms