RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 GPR52Q9Y2T5 361 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 CMAHPQ9Y471 501 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 AUP1Q9Y679 476 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 FER1L5A0AVI2 2057 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 A0A1W2PR77 199 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 F8VVB4 439 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 F8VWA3 439 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 ATP1B1P05026 303 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 SMIM18P0DKX4 95 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 PKLRP30613 574 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 RGS2P41220 211 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 TRAPPC10P48553 1259 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 SRSF9Q13242 221 aaKnown RBP eCLIP0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 SGCGQ13326 291 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 TRPC3Q13507 836 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 TRIM29Q14134 588 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 NR1D2Q14995 579 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 GPR33Q49SQ1 333 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 FCRLAQ7L513 359 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 R3HCC1LQ7Z5L2 792 aaKnown RBP0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 C5orf24Q7Z6I8 188 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 ZNF589Q86UQ0 364 aaPredicted RBP0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 LRRC49Q8IUZ0 686 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 RPAP2Q8IXW5 612 aaPredicted RBP0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 MMD2Q8IY49 270 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 MKXQ8IYA7 352 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 LYPD1Q8N2G4 141 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 FRMD1Q8N878 549 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 OR4D10Q8NGI6 311 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 ST8SIA4Q92187 359 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 NABP1Q96AH0 204 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 ELSPBP1Q96BH3 223 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 SLC22A18Q96BI1 424 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 FAM122AQ96E09 287 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 SIPA1Q96FS4 1042 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 SIGLEC12Q96PQ1 595 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 ZNF184Q99676 751 aaPredicted RBP0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 PNNQ9H307 717 aaKnown RBP0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 IKZF5Q9H5V7 419 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 CHMP1AQ9HD42 196 aaPredicted RBP0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 Q9N2K0 584 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 GKN1Q9NS71 199 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 TAS2R10Q9NYW0 307 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 GGA3Q9NZ52 723 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 ARMCX1Q9P291 453 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 PRDM4Q9UKN5 801 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 RAB26Q9ULW5 256 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 MOKQ9UQ07 419 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 MRPS18CQ9Y3D5 142 aaKnown RBP0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 COL1A2P08123 1366 aa0.66□□□□□ -2.3
RNU6-239P-201ENST00000390990 SALL1Q9NSC2 1324 aa0.65□□□□□ -2.3
RNU6-239P-201ENST00000390990 TRAV9-2A0A087WT02 112 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 LRCOL1A6NCL2 159 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 HOXC11O43248 304 aaPredicted RBP0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 PLIN1O60240 522 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 MED24O75448 989 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 PIGRP01833 764 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 ADORA3P0DMS8 318 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 ATP1A3P13637 1013 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 PPOXP50336 477 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 MAT1AQ00266 395 aaKnown RBP0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 CDK3Q00526 305 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 GOLGA8DPQ0D2H9 430 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 PPFIA1Q13136 1202 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 SYT14P1Q58G82 188 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 AGBL2Q5U5Z8 902 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 JADE1Q6IE81 842 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 TMPRSS11BQ86T26 416 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 NKAPQ8N5F7 415 aaKnown RBP0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 SPATA5Q8NB90 893 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 ZNF540Q8NDQ6 660 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 OR2L5Q8NG80 312 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 HTRA1Q92743 480 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 SLCO4A1Q96BD0 722 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 MAK16Q9BXY0 300 aaKnown RBP0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 MTMR12Q9C0I1 747 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 MOB1AQ9H8S9 216 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 ISG20L2Q9H9L3 353 aaKnown RBP0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 PILRAQ9UKJ1 303 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 NEU3Q9UQ49 428 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 TMED3Q9Y3Q3 217 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 GRIP1Q9Y3R0 1128 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 KCNE2Q9Y6J6 123 aa0.65□□□□□ -2.31
RNU6-239P-201ENST00000390990 FEZF1A0PJY2 475 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 SLC1A7O00341 560 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 ARPC2O15144 300 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 SCO2O43819 266 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 ERAL1O75616 437 aaKnown RBP0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 APBB3O95704 486 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 ACTL6AO96019 429 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 SRPRAP08240 638 aaKnown RBP0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 CPN1P15169 458 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 ZNF44P15621 663 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 AADACP22760 399 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 MDH2P40926 338 aaKnown RBP0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 PMELP40967 661 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 CAMPP49913 170 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 DCDC1P59894 354 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 IKQ13123 557 aaPredicted RBP0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 KRT33BQ14525 404 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms