RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 PI4KAP1Q8N8J0 262 aa4.91□□□□□ -1.62
SNORA40.4-201ENST00000390971 PRSS33Q8NF86 280 aa4.91□□□□□ -1.62
SNORA40.4-201ENST00000390971 OR5T2Q8NGG2 359 aa4.91□□□□□ -1.62
SNORA40.4-201ENST00000390971 EGFL8Q99944 293 aa4.91□□□□□ -1.62
SNORA40.4-201ENST00000390971 LRRC61Q9BV99 259 aa4.91□□□□□ -1.62
SNORA40.4-201ENST00000390971 TXLNGYQ9BZA5 131 aa4.91□□□□□ -1.62
SNORA40.4-201ENST00000390971 TEX10Q9NXF1 929 aaPredicted RBP4.91□□□□□ -1.62
SNORA40.4-201ENST00000390971 COL5A2P05997 1499 aaPredicted RBP4.9□□□□□ -1.62
SNORA40.4-201ENST00000390971 SOCS3O14543 225 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 IDH3BO43837 385 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 ZNF10P21506 573 aaPredicted RBP4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 AZGP1P25311 298 aaKnown RBP4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 HSD17B3P37058 310 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 SLC8A3P57103 927 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 LMO4P61968 165 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 DLK1P80370 383 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 RASGEF1BQ0VAM2 473 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 ILF2Q12905 390 aaKnown RBP4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 CDH18Q13634 790 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 RAPSNQ13702 412 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 TAB1Q15750 504 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 MOGAT2Q3SYC2 334 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 TCP11X2Q5H9J9 407 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 CTR9Q6PD62 1173 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 KIF6Q6ZMV9 814 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 IL17RELQ6ZVW7 336 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 FCRLAQ7L513 359 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 KLHDC1Q8N7A1 406 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 PIK3R3Q92569 461 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 OMA1Q96E52 524 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 CDCA3Q99618 268 aaPredicted RBP4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 GPATCH1Q9BRR8 931 aaKnown RBP4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 HOXD1Q9GZZ0 328 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 SWAP70Q9UH65 585 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 PRDM4Q9UKN5 801 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 SELENOKQ9Y6D0 94 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 SMAD5-AS1Q9Y6J3 95 aa4.9□□□□□ -1.63
SNORA40.4-201ENST00000390971 UBE2CO00762 179 aa4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 CEACAM4O75871 244 aa4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 GSRP00390 522 aa4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 ATP1B1P05026 303 aa4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 ERCC2P18074 760 aa4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 SOX3P41225 446 aa4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 CALCOCO2Q13137 446 aa4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 MTF1Q14872 753 aa4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 NONOQ15233 471 aaKnown RBP eCLIP4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 RASA2Q15283 850 aa4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 GLIPR1L2Q4G1C9 344 aa4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 SLC30A6Q6NXT4 461 aa4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 CLEC4GQ6UXB4 293 aa4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 FRRS1Q6ZNA5 592 aa4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 CHMP1BQ7LBR1 199 aa4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 ZNF558Q96NG5 402 aa4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 AGAP4Q96P64 663 aa4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 TDRD1Q9BXT4 1180 aaKnown RBP4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 ACTL8Q9H568 366 aa4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 RABEP2Q9H5N1 569 aa4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 XAB2Q9HCS7 855 aaKnown RBP4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 B3GAT2Q9NPZ5 323 aa4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 NDE1Q9NXR1 346 aa4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 ELF5Q9UKW6 265 aaPredicted RBP4.89□□□□□ -1.63
SNORA40.4-201ENST00000390971 LOC105371242A0A075B767 164 aa4.88□□□□□ -1.63
SNORA40.4-201ENST00000390971 DIAPH2O60879 1101 aa4.88□□□□□ -1.63
SNORA40.4-201ENST00000390971 GGPS1O95749 300 aa4.88□□□□□ -1.63
SNORA40.4-201ENST00000390971 SHC1P29353 583 aa4.88□□□□□ -1.63
SNORA40.4-201ENST00000390971 OR3A2P47893 321 aa4.88□□□□□ -1.63
SNORA40.4-201ENST00000390971 UBASH3AP57075 661 aa4.88□□□□□ -1.63
SNORA40.4-201ENST00000390971 MS4A2Q01362 244 aa4.88□□□□□ -1.63
SNORA40.4-201ENST00000390971 TMEM132DQ14C87 1099 aa4.88□□□□□ -1.63
SNORA40.4-201ENST00000390971 CES4AQ5XG92 561 aa4.88□□□□□ -1.63
SNORA40.4-201ENST00000390971 PAQR6Q6TCH4 344 aa4.88□□□□□ -1.63
SNORA40.4-201ENST00000390971 CHST3Q7LGC8 479 aa4.88□□□□□ -1.63
SNORA40.4-201ENST00000390971 RCOR2Q8IZ40 523 aa4.88□□□□□ -1.63
SNORA40.4-201ENST00000390971 LSMEM1Q8N8F7 131 aa4.88□□□□□ -1.63
SNORA40.4-201ENST00000390971 TSACCQ96A04 125 aaPredicted RBP4.88□□□□□ -1.63
SNORA40.4-201ENST00000390971 RMDN1Q96DB5 314 aa4.88□□□□□ -1.63
SNORA40.4-201ENST00000390971 PGM2Q96G03 612 aa4.88□□□□□ -1.63
SNORA40.4-201ENST00000390971 SDCBP2Q9H190 292 aa4.88□□□□□ -1.63
SNORA40.4-201ENST00000390971 PANK3Q9H999 370 aa4.88□□□□□ -1.63
SNORA40.4-201ENST00000390971 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.88□□□□□ -1.63
SNORA40.4-201ENST00000390971 KLK13Q9UKR3 277 aa4.88□□□□□ -1.63
SNORA40.4-201ENST00000390971 IL16Q14005 1332 aa4.88□□□□□ -1.63
SNORA40.4-201ENST00000390971 URADA6NGE7 173 aa4.87□□□□□ -1.63
SNORA40.4-201ENST00000390971 GATA1P15976 413 aaPredicted RBP4.87□□□□□ -1.63
SNORA40.4-201ENST00000390971 BDNFP23560 247 aa4.87□□□□□ -1.63
SNORA40.4-201ENST00000390971 PPP5CP53041 499 aa4.87□□□□□ -1.63
SNORA40.4-201ENST00000390971 ENPP2Q13822 863 aa4.87□□□□□ -1.63
SNORA40.4-201ENST00000390971 KRT71Q3SY84 523 aa4.87□□□□□ -1.63
SNORA40.4-201ENST00000390971 CATSPERDQ86XM0 798 aa4.87□□□□□ -1.63
SNORA40.4-201ENST00000390971 GPC2Q8N158 579 aa4.87□□□□□ -1.63
SNORA40.4-201ENST00000390971 ANKRD13CQ8N6S4 541 aa4.87□□□□□ -1.63
SNORA40.4-201ENST00000390971 Q8NBF4 154 aa4.87□□□□□ -1.63
SNORA40.4-201ENST00000390971 CAMKVQ8NCB2 501 aa4.87□□□□□ -1.63
SNORA40.4-201ENST00000390971 OR6J1Q8NGC5 347 aa4.87□□□□□ -1.63
SNORA40.4-201ENST00000390971 C9orf43Q8TAL5 461 aaPredicted RBP4.87□□□□□ -1.63
SNORA40.4-201ENST00000390971 EXT2Q93063 718 aa4.87□□□□□ -1.63
SNORA40.4-201ENST00000390971 SLC25A23Q9BV35 468 aa4.87□□□□□ -1.63
SNORA40.4-201ENST00000390971 MTHFD2LQ9H903 347 aaPredicted RBP4.87□□□□□ -1.63
SNORA40.4-201ENST00000390971 MUTYHQ9UIF7 546 aa4.87□□□□□ -1.63
SNORA40.4-201ENST00000390971 WIPI2Q9Y4P8 454 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms