RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 ITPRIPL2Q3MIP1 535 aa-0.87□□□□□ -2.55
TRAJ53-201ENST00000390485 HYIQ5T013 277 aa-0.87□□□□□ -2.55
TRAJ53-201ENST00000390485 DENND1BQ6P3S1 775 aa-0.87□□□□□ -2.55
TRAJ53-201ENST00000390485 R3HCC1LQ7Z5L2 792 aaKnown RBP-0.87□□□□□ -2.55
TRAJ53-201ENST00000390485 TADA2BQ86TJ2 420 aa-0.87□□□□□ -2.55
TRAJ53-201ENST00000390485 ZNF677Q86XU0 584 aa-0.87□□□□□ -2.55
TRAJ53-201ENST00000390485 SLC44A2Q8IWA5 706 aaPredicted RBP-0.87□□□□□ -2.55
TRAJ53-201ENST00000390485 GMCL1P1Q8NEA9 526 aa-0.87□□□□□ -2.55
TRAJ53-201ENST00000390485 LINS1Q8NG48 757 aa-0.87□□□□□ -2.55
TRAJ53-201ENST00000390485 HM13Q8TCT9 377 aa-0.87□□□□□ -2.55
TRAJ53-201ENST00000390485 KCNE4Q8WWG9 221 aa-0.87□□□□□ -2.55
TRAJ53-201ENST00000390485 TMEM47Q9BQJ4 181 aa-0.87□□□□□ -2.55
TRAJ53-201ENST00000390485 NUP85Q9BW27 656 aa-0.87□□□□□ -2.55
TRAJ53-201ENST00000390485 STRADBQ9C0K7 418 aa-0.87□□□□□ -2.55
TRAJ53-201ENST00000390485 IL1RAPQ9NPH3 570 aa-0.87□□□□□ -2.55
TRAJ53-201ENST00000390485 DDX21Q9NR30 783 aaKnown RBP eCLIP-0.87□□□□□ -2.55
TRAJ53-201ENST00000390485 CHST12Q9NRB3 414 aa-0.87□□□□□ -2.55
TRAJ53-201ENST00000390485 MRPS18CQ9Y3D5 142 aaKnown RBP-0.87□□□□□ -2.55
TRAJ53-201ENST00000390485 SPIN1Q9Y657 262 aaPredicted RBP-0.87□□□□□ -2.55
TRAJ53-201ENST00000390485 KAT6BQ8WYB5 2073 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 IGKV2-24A0A0C4DH68 120 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 A0A0J9YXV3 536 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 IQCMA0A1B0GVH7 501 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 ELOVL7A1L3X0 281 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 RNF103O00237 685 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 ZBTB43O43298 467 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 ZNF749O43361 778 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 RNASEH1O60930 286 aaKnown RBP-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 ANGP03950 147 aaKnown RBP-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 IGKV1-16P04430 117 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 HOXB5P09067 269 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 PGAM2P15259 253 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 HSD3B2P26439 372 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 POU1F1P28069 291 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 BRCC3P46736 316 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 RPL21P46778 160 aaKnown RBP-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 STT3AP46977 705 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 GABRB2P47870 512 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 LBX1P52954 281 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 PNLIPRP1P54315 467 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 PAX2Q02962 417 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 DAZ2Q13117 558 aaKnown RBP-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 ORC2Q13416 577 aaPredicted RBP-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 MVPQ14764 893 aaKnown RBP-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 PTPN14Q15678 1187 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 EXT1Q16394 746 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 PCK2Q16822 640 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 SOWAHCQ53LP3 525 aaPredicted RBP-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 COBLL1Q53SF7 1204 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 HCP5Q6MZN7 132 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 RFWD3Q6PCD5 774 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 NEGR1Q7Z3B1 354 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 C11orf65Q8NCR3 313 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 SCAMP5Q8TAC9 235 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 MORC4Q8TE76 937 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 RNF128Q8TEB7 428 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 CHURC1Q8WUH1 139 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 BRI3BPQ8WY22 251 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 HDAC2Q92769 488 aaKnown RBP-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 ZNF566Q969W8 418 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 C3orf49Q96BT1 292 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 HOOK2Q96ED9 719 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 TVP23CQ96ET8 276 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 PLEKHF1Q96S99 279 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 SMR3AQ99954 134 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 ABHD6Q9BV23 337 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 ZNF702PQ9H963 129 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 DAZ3Q9NR90 486 aaKnown RBP-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 PEMTQ9UBM1 199 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 TBX21Q9UL17 535 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 B3GALT5Q9Y2C3 310 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 TBX22Q9Y458 520 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 CACNG2Q9Y698 323 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 TUBGCP6Q96RT7 1819 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 MICAL3Q7RTP6 2002 aa-0.88□□□□□ -2.55
TRAJ53-201ENST00000390485 FRAS1Q86XX4 4008 aa-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 TRAV40A0A0B4J280 105 aa-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 SYNDIG1LA6NDD5 238 aa-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 FAM166BA8MTA8 275 aa-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 SNURFLB1AK76 121 aa-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 TMX2-CTNND1H3BSU7 103 aa-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 J3QR06 171 aa-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 KPNA5O15131 536 aa-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 NBR2O15453 112 aa-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 MTRF1O75570 445 aaKnown RBP-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 SERF1AO75920 110 aa-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 FGF18O76093 207 aa-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 ACTL6BO94805 426 aa-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 RCBTB2O95199 551 aa-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 HPNP05981 417 aa-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 UQCRFS1P1P0C7P4 283 aa-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 CRISP2P16562 243 aa-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 PSMB1P20618 241 aaKnown RBP-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 LONP1P36776 959 aaKnown RBP-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 MAGEB1P43366 347 aa-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 IER3P46695 156 aa-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 LHX1P48742 406 aa-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 MCM2P49736 904 aa-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 DMPKQ09013 629 aa-0.89□□□□□ -2.55
TRAJ53-201ENST00000390485 MLF2Q15773 248 aaPredicted RBP-0.89□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms