RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 CCDC160A6NGH7 325 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 NPC1O15118 1278 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 SPINT1O43278 529 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 VEGFDO43915 354 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 CREG1O75629 220 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 LRATO95237 230 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 CA3P07451 260 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 PDHA2P29803 388 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 CAPGP40121 348 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 GALK1P51570 392 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 DUOXA1Q1HG43 343 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 GTDC1Q4AE62 458 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 KCTD21Q4G0X4 260 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 ZNF658BQ4V348 819 aaPredicted RBP12.21□□□□□ -0.46
VPS16-202ENST00000380445 SPIN4Q56A73 249 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 BORAQ6PGQ7 559 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 TTC33Q6PID6 262 aaPredicted RBP12.21□□□□□ -0.46
VPS16-202ENST00000380445 ERN2Q76MJ5 926 aaKnown RBP12.21□□□□□ -0.46
VPS16-202ENST00000380445 TERB1Q8NA31 727 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 OR8J2Q8NGG1 315 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 FBXO30Q8TB52 745 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 CYGBQ8WWM9 190 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 FGF13Q92913 245 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 NCLNQ969V3 563 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 SLC47A1Q96FL8 570 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 EGLN2Q96KS0 407 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 OR4K3Q96R72 315 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 FAM129BQ96TA1 746 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 DPEP2Q9H4A9 486 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 ITM2CQ9NQX7 267 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 DCAF13Q9NV06 445 aaKnown RBP12.21□□□□□ -0.46
VPS16-202ENST00000380445 TUBA8Q9NY65 449 aaPredicted RBP12.21□□□□□ -0.46
VPS16-202ENST00000380445 PTTG2Q9NZH5 202 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 DNAJB9Q9UBS3 223 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 PDE4DIPQ5VU43 2346 aa12.21□□□□□ -0.46
VPS16-202ENST00000380445 PRRC2BQ5JSZ5 2229 aaKnown RBP12.21□□□□□ -0.46
VPS16-202ENST00000380445 TBC1D3BA6NDS4 549 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 H0YAE9 185 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 MAGEB3O15480 346 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 MT-ND1P03886 318 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 MTHFRP42898 656 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 DDX39BQ13838 428 aaKnown RBP12.2□□□□□ -0.46
VPS16-202ENST00000380445 E2F2Q14209 437 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 GAB4Q2WGN9 574 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 CCSMST1Q4G0I0 132 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 OR4F3Q6IEY1 312 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 MED27Q6P2C8 311 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 ADGRD2Q7Z7M1 963 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 ZDHHC13Q8IUH4 622 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 SYTL1Q8IYJ3 562 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 PHACTR4Q8IZ21 702 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 VPS37AQ8NEZ2 397 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 CXorf40AQ8TE69 158 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 PANX1Q96RD7 426 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 INIPQ9NRY2 104 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 DYRK1BQ9Y463 629 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 FADS3Q9Y5Q0 445 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 MMP20O60882 483 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 LILRB5O75023 590 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 COX7A2P14406 83 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 HOXD12P35452 270 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 ALDH3A2P51648 485 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 PSMD7P51665 324 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 ERVK-21P61565 698 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 DUSP6Q16828 381 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 PAGE2BQ5JRK9 111 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 PATL1Q86TB9 770 aaKnown RBP12.2□□□□□ -0.46
VPS16-202ENST00000380445 SERPINA11Q86U17 422 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 ANKRD46Q86W74 232 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 OR7G3Q8NG95 312 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 GFM2Q969S9 779 aaKnown RBP12.2□□□□□ -0.46
VPS16-202ENST00000380445 TMBIM1Q969X1 311 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 RDH12Q96NR8 316 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 INPP5KQ9BT40 448 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 EFCAB11Q9BUY7 163 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 EBPLQ9BY08 206 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 REXO4Q9GZR2 422 aaKnown RBP12.2□□□□□ -0.46
VPS16-202ENST00000380445 TRPV4Q9HBA0 871 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 HPS4Q9NQG7 708 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 MYO7AQ13402 2215 aa12.2□□□□□ -0.46
VPS16-202ENST00000380445 TMEM247A6NEH6 219 aa12.19□□□□□ -0.46
VPS16-202ENST00000380445 PLOD2O00469 737 aa12.19□□□□□ -0.46
VPS16-202ENST00000380445 GNGT2O14610 69 aa12.19□□□□□ -0.46
VPS16-202ENST00000380445 FPGTO14772 594 aa12.19□□□□□ -0.46
VPS16-202ENST00000380445 EPN2O95208 641 aa12.19□□□□□ -0.46
VPS16-202ENST00000380445 HPRP00739 348 aa12.19□□□□□ -0.46
VPS16-202ENST00000380445 CST1P01037 141 aa12.19□□□□□ -0.46
VPS16-202ENST00000380445 ALBP02768 609 aa12.19□□□□□ -0.46
VPS16-202ENST00000380445 HOXB9P17482 250 aaPredicted RBP12.19□□□□□ -0.46
VPS16-202ENST00000380445 EN2P19622 333 aaPredicted RBP12.19□□□□□ -0.46
VPS16-202ENST00000380445 PTPN6P29350 595 aa12.19□□□□□ -0.46
VPS16-202ENST00000380445 METAP1P53582 386 aa12.19□□□□□ -0.46
VPS16-202ENST00000380445 ARSFP54793 590 aa12.19□□□□□ -0.46
VPS16-202ENST00000380445 LRRC74AQ0VAA2 488 aa12.19□□□□□ -0.46
VPS16-202ENST00000380445 MESP2Q0VG99 397 aa12.19□□□□□ -0.46
VPS16-202ENST00000380445 EPS8Q12929 822 aa12.19□□□□□ -0.46
VPS16-202ENST00000380445 HIST2H2ACQ16777 129 aaPredicted RBP12.19□□□□□ -0.46
VPS16-202ENST00000380445 FAM46CQ5VWP2 391 aa12.19□□□□□ -0.46
VPS16-202ENST00000380445 HIST2H2AA3Q6FI13 130 aa12.19□□□□□ -0.46
VPS16-202ENST00000380445 ABRAXAS1Q6UWZ7 409 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms