RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 ZNF750Q32MQ0 723 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 DEFB134Q4QY38 66 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.85□□□□□ -1.15
CKAP2-203ENST00000378037 SULT1C3Q6IMI6 304 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 ENPP6Q6UWR7 440 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 ARPINQ7Z6K5 226 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 TMC8Q8IU68 726 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 CLVS1Q8IUQ0 354 aaPredicted RBP7.85□□□□□ -1.15
CKAP2-203ENST00000378037 ZNF683Q8IZ20 524 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 RAB42Q8N4Z0 105 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 PSD4Q8NDX1 1056 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 HUS1BQ8NHY5 278 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 REXO5Q96IC2 774 aaKnown RBP7.85□□□□□ -1.15
CKAP2-203ENST00000378037 ART5Q96L15 291 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 UBXN10Q96LJ8 280 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 SLC29A1Q99808 456 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 CACYBPQ9HB71 228 aaKnown RBP7.85□□□□□ -1.15
CKAP2-203ENST00000378037 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.85□□□□□ -1.15
CKAP2-203ENST00000378037 LRRC72A6NJI9 287 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 FBP2O00757 339 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 HYAL3O43820 417 aaPredicted RBP7.85□□□□□ -1.15
CKAP2-203ENST00000378037 RSL1D1O76021 490 aaKnown RBP7.85□□□□□ -1.15
CKAP2-203ENST00000378037 PAPSS2O95340 614 aaPredicted RBP7.85□□□□□ -1.15
CKAP2-203ENST00000378037 SOX14O95416 240 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 C6orf47O95873 294 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 VIPP01282 170 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 IGLV3-27P01718 113 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 PSMB9P28065 219 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 ERVK-8P63133 956 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 XIAPP98170 497 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 SRSF5Q13243 272 aaKnown RBP7.85□□□□□ -1.15
CKAP2-203ENST00000378037 FAM98BQ52LJ0 330 aaKnown RBP7.85□□□□□ -1.15
CKAP2-203ENST00000378037 ANKRD54Q6NXT1 300 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 CLEC14AQ86T13 490 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 C10orf53Q8N6V4 93 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 OSCP1Q8WVF1 389 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 VMP1Q96GC9 406 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 TRMOQ9BU70 441 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 TTTY10Q9BZA0 68 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 ZNF576Q9H609 170 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 RMND5AQ9H871 391 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 SLC23A2Q9UGH3 650 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 MUC3AQ02505 3323 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 SRRM3A6NNA2 597 aaPredicted RBP7.84□□□□□ -1.15
CKAP2-203ENST00000378037 ZW10O43264 779 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 NARSO43776 548 aaKnown RBP7.84□□□□□ -1.15
CKAP2-203ENST00000378037 NDUFS2O75306 463 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 SOX30O94993 753 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 GNAO1P09471 354 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 IL7RP16871 459 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 ENGP17813 658 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 CR2P20023 1033 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 HTR1BP28222 390 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 SLC19A1P41440 591 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 COL13A1Q5TAT6 717 aaPredicted RBP7.84□□□□□ -1.15
CKAP2-203ENST00000378037 TSSK4Q6SA08 328 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 SBSNQ6UWP8 590 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 VN1R5Q7Z5H4 357 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 CCDC116Q8IYX3 515 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 TEX26Q8N6G2 289 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 OR8K5Q8NH50 307 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 THAP3Q8WTV1 239 aaPredicted RBP7.84□□□□□ -1.15
CKAP2-203ENST00000378037 BTN2A2Q8WVV5 523 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 RHBDF1Q96CC6 855 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 TRIB3Q96RU7 358 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 KCNK12Q9HB15 430 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 GIN1Q9NXP7 522 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 VPS29Q9UBQ0 182 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 LYVE1Q9Y5Y7 322 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 NCOR2Q9Y618 2525 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 FREM2Q5SZK8 3169 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 CPED1A4D0V7 1026 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 CAPN14A8MX76 684 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 TOR1BO14657 336 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 NR2F1P10589 423 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 IDSP22304 550 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 P2RY2P41231 377 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 MNX1P50219 401 aaPredicted RBP7.84□□□□□ -1.15
CKAP2-203ENST00000378037 CLCN7P51798 805 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 PRKCQQ04759 706 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 ELP6Q0PNE2 266 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 GRSF1Q12849 480 aaKnown RBP eCLIP7.84□□□□□ -1.15
CKAP2-203ENST00000378037 TLR1Q15399 786 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 MAPK11Q15759 364 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 PRAMEF13Q5VWM6 474 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 Q6ZSR9 355 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.84□□□□□ -1.15
CKAP2-203ENST00000378037 VN1R2Q8NFZ6 395 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 OR5M3Q8NGP4 307 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 KCNN1Q92952 543 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 DACH2Q96NX9 599 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 CGREF1Q99674 301 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 CCM2Q9BSQ5 444 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 ARNT2Q9HBZ2 717 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 VCX3AQ9NNX9 186 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 MIA3Q5JRA6 1907 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 LOC100506127A0A0U1RQW1 187 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.84□□□□□ -1.15
CKAP2-203ENST00000378037 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms