RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 MAPK1P28482 360 aa12.81□□□□□ -0.36
ACTN1-202ENST00000376839 CBSP35520 551 aa12.81□□□□□ -0.36
ACTN1-202ENST00000376839 LIPAP38571 399 aa12.81□□□□□ -0.36
ACTN1-202ENST00000376839 TMED10P49755 219 aaKnown RBP12.81□□□□□ -0.36
ACTN1-202ENST00000376839 TAF12Q16514 161 aa12.81□□□□□ -0.36
ACTN1-202ENST00000376839 AGAP7PQ5VUJ5 663 aa12.81□□□□□ -0.36
ACTN1-202ENST00000376839 LRRC66Q68CR7 880 aa12.81□□□□□ -0.36
ACTN1-202ENST00000376839 EIF3MQ7L2H7 374 aaKnown RBP12.81□□□□□ -0.36
ACTN1-202ENST00000376839 RNF180Q86T96 592 aa12.81□□□□□ -0.36
ACTN1-202ENST00000376839 SLC22A16Q86VW1 577 aa12.81□□□□□ -0.36
ACTN1-202ENST00000376839 HPS1Q92902 700 aa12.81□□□□□ -0.36
ACTN1-202ENST00000376839 COPS8Q99627 209 aa12.81□□□□□ -0.36
ACTN1-202ENST00000376839 P2RY13Q9BPV8 354 aa12.81□□□□□ -0.36
ACTN1-202ENST00000376839 SLC12A9Q9BXP2 914 aa12.81□□□□□ -0.36
ACTN1-202ENST00000376839 DSN1Q9H410 356 aa12.81□□□□□ -0.36
ACTN1-202ENST00000376839 ELAC1Q9H777 363 aaKnown RBP12.81□□□□□ -0.36
ACTN1-202ENST00000376839 REEP1Q9H902 201 aa12.81□□□□□ -0.36
ACTN1-202ENST00000376839 ZBTB20Q9HC78 741 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-202ENST00000376839 SCHIP1Q9P0W5 487 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-202ENST00000376839 OSGIN1Q9UJX0 560 aa12.81□□□□□ -0.36
ACTN1-202ENST00000376839 LRFN2Q9ULH4 789 aa12.81□□□□□ -0.36
ACTN1-202ENST00000376839 BTBD3Q9Y2F9 522 aa12.81□□□□□ -0.36
ACTN1-202ENST00000376839 TMED5Q9Y3A6 229 aa12.81□□□□□ -0.36
ACTN1-202ENST00000376839 THSD7BQ9C0I4 1608 aa12.81□□□□□ -0.36
ACTN1-202ENST00000376839 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-202ENST00000376839 EFCAB9A8MZ26 197 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 COQ9O75208 318 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 VIPP01282 170 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 COX7A2P14406 83 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 CD40LGP29965 261 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 AQP1P29972 269 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 GRK3P35626 688 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 TRPC1P48995 793 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 ITGA1P56199 1179 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 MVKQ03426 396 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 CAMK2GQ13555 558 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-202ENST00000376839 PROX2Q3B8N5 592 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 LRRC73Q5JTD7 316 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 DGKKQ5KSL6 1271 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 GPR153Q6NV75 609 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 FAHD1Q6P587 224 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 TMEM150AQ86TG1 271 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 PLD3Q8IV08 490 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 PGBD3Q8N328 593 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 VOPP1Q96AW1 172 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 PITX2Q99697 317 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 CLSTN3Q9BQT9 956 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 BBS2Q9BXC9 721 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 CCNB1IP1Q9NPC3 277 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 SLCO3A1Q9UIG8 710 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.8□□□□□ -0.36
ACTN1-202ENST00000376839 WDR37Q9Y2I8 494 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 PLXNB3Q9ULL4 1909 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 GFRA2O00451 464 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 BNIP3LO60238 219 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 KDM1AO60341 852 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 CD22P20273 847 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 PRPS1L1P21108 318 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 LHCGRP22888 699 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 C21orf33P30042 268 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-202ENST00000376839 CHIT1Q13231 466 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 RETSATQ6NUM9 610 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 SERPINA13PQ6UXR4 307 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 MSANTD1Q6ZTZ1 278 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 FAM9CQ8IZT9 166 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 CBARPQ8N350 705 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-202ENST00000376839 MINDY2Q8NBR6 621 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 PSMA8Q8TAA3 256 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 ASB11Q8WXH4 323 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 MAL2Q969L2 176 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 ZHX1-C8orf76Q96EF9 292 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 C2orf49Q9BVC5 232 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-202ENST00000376839 AMBNQ9NP70 447 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 TMEM184CQ9NVA4 438 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 YIPF1Q9Y548 306 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 PCDHGA6Q9Y5G7 932 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 MICAL3Q7RTP6 2002 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 LAMA2P24043 3122 aaKnown RBP12.8□□□□□ -0.36
ACTN1-202ENST00000376839 SOCS5O75159 536 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 SH3BGRLO75368 114 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 ALOX5P09917 674 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 LAMP1P11279 417 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 SLC13A2Q13183 592 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 DDX39BQ13838 428 aaKnown RBP12.8□□□□□ -0.36
ACTN1-202ENST00000376839 RGMBQ6NW40 437 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 ARL14EPQ8N8R7 260 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-202ENST00000376839 MCFD2Q8NI22 146 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 CSGALNACT1Q8TDX6 532 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 PROX1Q92786 737 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 SH3KBP1Q96B97 665 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 C7orf34Q96L11 122 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 KCNC2Q96PR1 638 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 MTERF1Q99551 399 aaKnown RBP12.8□□□□□ -0.36
ACTN1-202ENST00000376839 DCSTAMPQ9H295 470 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 TMPRSS11EQ9UL52 423 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 RNF6Q9Y252 685 aa12.8□□□□□ -0.36
ACTN1-202ENST00000376839 LAMA3Q16787 3333 aa12.79□□□□□ -0.36
ACTN1-202ENST00000376839 A0A1W2PQ67 120 aa12.79□□□□□ -0.36
ACTN1-202ENST00000376839 E9PQ18 207 aa12.79□□□□□ -0.36
ACTN1-202ENST00000376839 MTX2O75431 263 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms