RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 THAP11Q96EK4 314 aa14.04□□□□□ -0.16
HDAC6-204ENST00000376643 MMABQ96EY8 250 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-204ENST00000376643 C10orf90Q96M02 699 aa14.04□□□□□ -0.16
HDAC6-204ENST00000376643 TRIM56Q9BRZ2 755 aaKnown RBP14.04□□□□□ -0.16
HDAC6-204ENST00000376643 RUBCNLQ9H714 662 aa14.04□□□□□ -0.16
HDAC6-204ENST00000376643 C19orf25Q9UFG5 118 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-204ENST00000376643 RUVBL1Q9Y265 456 aaKnown RBP14.04□□□□□ -0.16
HDAC6-204ENST00000376643 UNC79Q9P2D8 2635 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 PABPN1LA6NDY0 278 aaKnown RBP14.03□□□□□ -0.16
HDAC6-204ENST00000376643 GOLGA8KD6RF30 607 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 H0YIG0 161 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 GOLGA8TH3BQL2 631 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 SMAPO00193 183 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 ALOX12BO75342 701 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 SLC16A8O95907 504 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 SYF2O95926 243 aaKnown RBP14.03□□□□□ -0.16
HDAC6-204ENST00000376643 PRR35P0CG20 571 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 CCND1P24385 295 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 SLC26A3P40879 764 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 KCNJ1P48048 391 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.03□□□□□ -0.163e-6■□□□□ 10.8
HDAC6-204ENST00000376643 ZNF425Q6IV72 752 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 SUSD1Q6UWL2 747 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 CES3Q6UWW8 571 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 REXO1L1PQ8IX06 675 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 PALM2Q8IXS6 379 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 PRSS58Q8IYP2 241 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 ZNF669Q96BR6 464 aaPredicted RBP14.03□□□□□ -0.16
HDAC6-204ENST00000376643 OR2A5Q96R48 311 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 PKP4Q99569 1192 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 FAM167BQ9BTA0 163 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 TUBB6Q9BUF5 446 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 RNF32Q9H0A6 362 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 PCYOX1Q9UHG3 505 aa14.03□□□□□ -0.16
HDAC6-204ENST00000376643 TSR3Q9UJK0 312 aaKnown RBP14.03□□□□□ -0.16
HDAC6-204ENST00000376643 LOC102723996A0A087X1L8 192 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 IGHV1-45A0A0A0MS14 117 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 MASP2O00187 686 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 KIF5CO60282 957 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 CRYABP02511 175 aaKnown RBP14.02□□□□□ -0.17
HDAC6-204ENST00000376643 KRT14P02533 472 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 RNF224P0DH78 156 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 COX6A1P12074 109 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 RGS4P49798 205 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 CLCN7P51798 805 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 RPS15AP62244 130 aaKnown RBP14.02□□□□□ -0.17
HDAC6-204ENST00000376643 SKP1P63208 163 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 PTK6Q13882 451 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 VWA2Q5GFL6 755 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 MTFR2Q6P444 385 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 CENPUQ71F23 418 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 GAS2L3Q86XJ1 694 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 LURAP1LQ8IV03 231 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 OR1N1Q8NGS0 311 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 GRK7Q8WTQ7 553 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 ZNF480Q8WV37 535 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 ASB11Q8WXH4 323 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 HAS2Q92819 552 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 FAM136AQ96C01 138 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 PBKQ96KB5 322 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 MAGEB10Q96LZ2 347 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-204ENST00000376643 SLX1AQ9BQ83 275 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 CCDC177Q9NQR7 707 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-204ENST00000376643 TMEM184CQ9NVA4 438 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 ABI3Q9P2A4 366 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 NTNG1Q9Y2I2 539 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 PRRC2CQ9Y520 2896 aaKnown RBP14.02□□□□□ -0.17
HDAC6-204ENST00000376643 POLEQ07864 2286 aa14.02□□□□□ -0.17
HDAC6-204ENST00000376643 GOLGA6L10A0A0M3HER8 536 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 E7ENX8 843 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 E2F3O00716 465 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 MLYCDO95822 493 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 C8orf89P0DMQ9 161 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 GRK3P35626 688 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 SOX11P35716 441 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 DCTP40126 519 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 SKIV2L2P42285 1042 aaKnown RBP14.01□□□□□ -0.17
HDAC6-204ENST00000376643 VPS41P49754 854 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 TNFSF10P50591 281 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 TAP2Q03519 686 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 Q0VFX4 171 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 SP140Q13342 867 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 ABHD17BQ5VST6 288 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 NIPAL1Q6NVV3 410 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 PRELID2Q8N945 189 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 DNAJB8Q8NHS0 232 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 BRIX1Q8TDN6 353 aaKnown RBP14.01□□□□□ -0.17
HDAC6-204ENST00000376643 MAGOHBQ96A72 148 aaKnown RBP14.01□□□□□ -0.17
HDAC6-204ENST00000376643 C8orf44Q96CB5 159 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.01□□□□□ -0.17
HDAC6-204ENST00000376643 ZNF700Q9H0M5 742 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 PTGFRNQ9P2B2 879 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 SUCOQ9UBS9 1254 aaKnown RBP14.01□□□□□ -0.17
HDAC6-204ENST00000376643 MKL2Q9ULH7 1088 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 OSGIN2Q9Y236 505 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 DHRS7Q9Y394 339 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 CSAG2Q9Y5P2 127 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 CCDC88CQ9P219 2028 aa14.01□□□□□ -0.17
HDAC6-204ENST00000376643 KCNE1BA0A087WTH5 132 aa14□□□□□ -0.17
HDAC6-204ENST00000376643 GFYI3L273 518 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms