RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	TICAM1	Q8IUC6	712 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	ADHFE1	Q8IWW8	467 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	ZNF655	Q8N720	491 aa	Predicted RBP	13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	TTC29	Q8NA56	475 aa	Predicted RBP	13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	UBE2E3	Q969T4	207 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	SLC25A23	Q9BV35	468 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	REXO4	Q9GZR2	422 aa	Known RBP	13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	NDE1	Q9NXR1	346 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	WDR37	Q9Y2I8	494 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	DNAJC15	Q9Y5T4	150 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	CCDC189	A1A4V9	331 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	OR2W5	A6NFC9	320 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	NQO1	P15559	274 aa	Known RBP	13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	IL10	P22301	178 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	CSTF2	P33240	577 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	HPCAL1	P37235	193 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	MAGEA3	P43357	314 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	DNAL1	Q4LDG9	190 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	RELL1	Q8IUW5	271 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	RBM18	Q96H35	190 aa	Known RBP	13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	CPNE7	Q9UBL6	633 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	ACSL5	Q9ULC5	683 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	ZFR2	Q9UPR6	939 aa	Known RBP	13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	FAM149A	A5PLN7	773 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	TLR4	O00206	839 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	KIF1C	O43896	1103 aa	Known RBP	13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	NRP2	O60462	931 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	AP1S2	P56377	157 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	RPS26	P62854	115 aa	Known RBP	13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	SLC9B2	Q86UD5	537 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	FAM47B	Q8NA70	645 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	OR10A6	Q8NH74	314 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	HUS1B	Q8NHY5	278 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	TRMO	Q9BU70	441 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	EHD1	Q9H4M9	534 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	TRIO	O75962	3097 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	SLC28A1	O00337	649 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	PEX1	O43933	1283 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	EPN2	O95208	641 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	NR2F1	P10589	423 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	AOAH	P28039	575 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	NTS	P30990	170 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	POLR2J	P52435	117 aa	Known RBP	13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	KCNAB1	Q14722	419 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	NFATC4	Q14934	902 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	TAF11	Q15544	211 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	PLEKHS1	Q5SXH7	462 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	KRT80	Q6KB66	452 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	WDR53	Q7Z5U6	358 aa	Predicted RBP	13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	CCDC116	Q8IYX3	515 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	CENPT	Q96BT3	561 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	ASB2	Q96Q27	587 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	VCX3B	Q9H321	246 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	COPG1	Q9Y678	874 aa	Known RBP	13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	MANBA	O00462	879 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	DNAJC8	O75937	253 aa	Predicted RBP	13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	JMJD7	P0C870	316 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	SLC16A1	P53985	500 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	MC1R	Q01726	317 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	PLOD1	Q02809	727 aa	Predicted RBP	13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	PAGE2	Q7Z2X7	111 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	DHDDS	Q86SQ9	333 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	ZNF276	Q8N554	614 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	SLC37A2	Q8TED4	501 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	DLG3	Q92796	817 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	RAB8B	Q92930	207 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	GLMN	Q92990	594 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	EBF1	Q9UH73	591 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	NOTCH4	Q99466	2003 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	AKAP6	Q13023	2319 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	AREL1	O15033	823 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	PTPN4	P29074	926 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	OXTR	P30559	389 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	RFTN2	Q52LD8	501 aa	Predicted RBP	13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	HENMT1	Q5T8I9	393 aa	Known RBP	13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	FRMD7	Q6ZUT3	714 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	CYGB	Q8WWM9	190 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	PLAC1	Q9HBJ0	212 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	ZNF780B	Q9Y6R6	833 aa		13.07	□□□□□ -0.32
DDR1-225	ENST00000376568	CACNA1A	O00555	2505 aa		13.06	□□□□□ -0.32
DDR1-225	ENST00000376568		A0A1B0GTL3	188 aa		13.06	□□□□□ -0.32
DDR1-225	ENST00000376568	KIR2DL1	P43626	348 aa	Predicted RBP	13.06	□□□□□ -0.32
DDR1-225	ENST00000376568	GPR18	Q14330	331 aa		13.06	□□□□□ -0.32
DDR1-225	ENST00000376568	HOMEZ	Q8IX15	550 aa		13.06	□□□□□ -0.32
DDR1-225	ENST00000376568	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	13.06	□□□□□ -0.32
DDR1-225	ENST00000376568	OR7A2P	Q8NGA2	310 aa		13.06	□□□□□ -0.32
DDR1-225	ENST00000376568	RSC1A1	Q92681	617 aa		13.06	□□□□□ -0.32
DDR1-225	ENST00000376568	RHBDF1	Q96CC6	855 aa		13.06	□□□□□ -0.32
DDR1-225	ENST00000376568	C3orf30	Q96M34	536 aa		13.06	□□□□□ -0.32
DDR1-225	ENST00000376568	JSRP1	Q96MG2	331 aa	Predicted RBP	13.06	□□□□□ -0.32
DDR1-225	ENST00000376568	C7orf26	Q96N11	449 aa		13.06	□□□□□ -0.32
DDR1-225	ENST00000376568	GUCD1	Q96NT3	240 aa		13.06	□□□□□ -0.32
DDR1-225	ENST00000376568	SAR1A	Q9NR31	198 aa		13.06	□□□□□ -0.32
DDR1-225	ENST00000376568	ALKBH4	Q9NXW9	302 aa		13.06	□□□□□ -0.32
DDR1-225	ENST00000376568	ACSL6	Q9UKU0	697 aa		13.06	□□□□□ -0.32
DDR1-225	ENST00000376568	PCDHB11	Q9Y5F2	797 aa		13.06	□□□□□ -0.32
DDR1-225	ENST00000376568	EME2	A4GXA9	379 aa	Predicted RBP	13.06	□□□□□ -0.32
DDR1-225	ENST00000376568	RAB28	P51157	221 aa		13.06	□□□□□ -0.32

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