RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 PABPN1LA6NDY0 278 aaKnown RBP10.77□□□□□ -0.69
CCDC40-203ENST00000374877 EVPLLA8MZ36 301 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 CBX4O00257 560 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 VIPP01282 170 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 GZMMP51124 257 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 KCNQ1P51787 676 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 TWF1Q12792 350 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 PROX2Q3B8N5 592 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 USP39Q53GS9 565 aaKnown RBP10.77□□□□□ -0.69
CCDC40-203ENST00000374877 METTL4Q8N3J2 472 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 PARP16Q8N5Y8 322 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 FAM126AQ9BYI3 521 aaPredicted RBP10.77□□□□□ -0.69
CCDC40-203ENST00000374877 NACA2Q9H009 215 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 GABARAPL1Q9H0R8 117 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 MTIF3Q9H2K0 278 aaKnown RBP10.77□□□□□ -0.69
CCDC40-203ENST00000374877 MOV10Q9HCE1 1003 aaKnown RBP10.77□□□□□ -0.69
CCDC40-203ENST00000374877 SERHLQ9NQF3 203 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 GPRC5BQ9NZH0 403 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 AGO1Q9UL18 857 aaKnown RBP10.77□□□□□ -0.69
CCDC40-203ENST00000374877 ANKRD66B4E2M5 251 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 MANBAO00462 879 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 WNT9AO14904 365 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 PTTG1O95997 202 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 TAF10Q12962 218 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 NPRL3Q12980 569 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 RSPO2Q6UXX9 243 aaPredicted RBP10.76□□□□□ -0.69
CCDC40-203ENST00000374877 MBOAT1Q6ZNC8 495 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 ZNF551Q7Z340 670 aaPredicted RBP10.76□□□□□ -0.69
CCDC40-203ENST00000374877 CLDN19Q8N6F1 224 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 CELF2-AS1Q8N7Q2 184 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 KIAA1958Q8N8K9 716 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 FBXO22Q8NEZ5 403 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 CLP1Q92989 425 aaKnown RBP10.76□□□□□ -0.69
CCDC40-203ENST00000374877 TPD52L3Q96J77 140 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 CLPBQ9H078 707 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 TMEM98Q9Y2Y6 226 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 KIAA0100Q14667 2235 aaKnown RBP10.76□□□□□ -0.69
CCDC40-203ENST00000374877 DNTTP04053 509 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 IL1RNP18510 177 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 RGS4P49798 205 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 NUDT6P53370 316 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 CYP4F2P78329 520 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 CAMK2GQ13555 558 aaPredicted RBP10.76□□□□□ -0.69
CCDC40-203ENST00000374877 ARHGEF7Q14155 803 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 TPGS2Q68CL5 300 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 KIAA1841Q6NSI8 718 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 USP43Q70EL4 1123 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 ENTHD1Q8IYW4 607 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 LATS2Q9NRM7 1088 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 DDX28Q9NUL7 540 aaKnown RBP10.76□□□□□ -0.69
CCDC40-203ENST00000374877 SIRT5Q9NXA8 310 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 THUMPD1Q9NXG2 353 aaKnown RBP10.76□□□□□ -0.69
CCDC40-203ENST00000374877 M0R082 166 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 IDH3BO43837 385 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 MFN2O95140 757 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 MED26O95402 600 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 HSMCR30P0CW71 290 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 EFNA1P20827 205 aaPredicted RBP10.76□□□□□ -0.69
CCDC40-203ENST00000374877 TACR1P25103 407 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 RPS24P62847 133 aaKnown RBP10.76□□□□□ -0.69
CCDC40-203ENST00000374877 UBE2UQ5VVX9 321 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 ALG1LQ6GMV1 187 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 OR4F3Q6IEY1 312 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 TUBA3EQ6PEY2 450 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 PRSS55Q6UWB4 352 aaPredicted RBP10.76□□□□□ -0.69
CCDC40-203ENST00000374877 TMCO2Q7Z6W1 182 aaPredicted RBP10.76□□□□□ -0.69
CCDC40-203ENST00000374877 PLPP6Q8IY26 295 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 KCNC2Q96PR1 638 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 RAD9AQ99638 391 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 CHCHD6Q9BRQ6 235 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 BOCQ9BWV1 1114 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 ADGRE3Q9BY15 652 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 GPR63Q9BZJ6 419 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 CD244Q9BZW8 370 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 CCSER2Q9H7U1 834 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.76□□□□□ -0.69
CCDC40-203ENST00000374877 AFF4Q9UHB7 1163 aaKnown RBP10.76□□□□□ -0.69
CCDC40-203ENST00000374877 ZNF451Q9Y4E5 1061 aa10.76□□□□□ -0.69
CCDC40-203ENST00000374877 GOLGA8CPA6NN73 597 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 VNN2O95498 520 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 APOA1P02647 267 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 EPB42P16452 691 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 PTPN2P17706 415 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 CD9P21926 228 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 LRIF1Q5T3J3 769 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 PDE12Q6L8Q7 609 aaKnown RBP10.75□□□□□ -0.69
CCDC40-203ENST00000374877 PNCKQ6P2M8 343 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 FAM151BQ6UXP7 276 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 STK40Q8N2I9 435 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 PAF1Q8N7H5 531 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 LKAAEAR1Q8TD35 194 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 APH1BQ8WW43 257 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 HSH2DQ96JZ2 352 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 Q96MT0 163 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 DPH2Q9BQC3 489 aaPredicted RBP10.75□□□□□ -0.69
CCDC40-203ENST00000374877 CDADC1Q9BWV3 514 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 ACPTQ9BZG2 426 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 OR51E2Q9H255 320 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 TNKS2Q9H2K2 1166 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 RUBCNLQ9H714 662 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms