RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 HIBCHQ6NVY1 386 aaPredicted RBP13.09□□□□□ -0.31
CXCL12-202ENST00000374426 LRRC8BQ6P9F7 803 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 TMEM207Q6UWW9 146 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 SLC13A5Q86YT5 568 aaPredicted RBP13.09□□□□□ -0.31
CXCL12-202ENST00000374426 TMEM139Q8IV31 216 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 ZC3H7AQ8IWR0 971 aaKnown RBP13.09□□□□□ -0.31
CXCL12-202ENST00000374426 CCDC89Q8N998 374 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 SMPDL3AQ92484 453 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 LPGAT1Q92604 370 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 MMABQ96EY8 250 aaPredicted RBP13.09□□□□□ -0.31
CXCL12-202ENST00000374426 CCDC120Q96HB5 630 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 PHF12Q96QT6 1004 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 OR2A5Q96R48 311 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 DESI2Q9BSY9 194 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 IL22Q9GZX6 179 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 RNF32Q9H0A6 362 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 ZNF700Q9H0M5 742 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 MRPS30Q9NP92 439 aaKnown RBP13.09□□□□□ -0.31
CXCL12-202ENST00000374426 MKKSQ9NPJ1 570 aaPredicted RBP13.09□□□□□ -0.31
CXCL12-202ENST00000374426 EIF2B3Q9NR50 452 aaKnown RBP13.09□□□□□ -0.31
CXCL12-202ENST00000374426 ABI3Q9P2A4 366 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 GALPQ9UBC7 116 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 CPAMD8Q8IZJ3 1885 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 TRGV8A0A0C4DH27 118 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 GOLGA8KD6RF30 607 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 GOLGA8TH3BQL2 631 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 MYO1CO00159 1063 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 PSIP1O75475 530 aaKnown RBP13.08□□□□□ -0.32
CXCL12-202ENST00000374426 VAPBO95292 243 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 RASAL1O95294 804 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 UQCRHP07919 91 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 FMO4P31512 558 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 RPA3P35244 121 aaPredicted RBP13.08□□□□□ -0.32
CXCL12-202ENST00000374426 SNRPNP63162 240 aaKnown RBP13.08□□□□□ -0.32
CXCL12-202ENST00000374426 TYSND1Q2T9J0 566 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 ANKRD20A4Q4UJ75 823 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 SEL1L2Q5TEA6 688 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 GARNL3Q5VVW2 1013 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 TMEM205Q6UW68 189 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 CES3Q6UWW8 571 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 OTUD6BQ8N6M0 293 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 MFSD3Q96ES6 412 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 IMMP1LQ96LU5 166 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 BAG1Q99933 345 aaPredicted RBP13.08□□□□□ -0.32
CXCL12-202ENST00000374426 DRC3Q9H069 523 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 TAC3Q9UHF0 121 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 MKL2Q9ULH7 1088 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 ZFHX3Q15911 3703 aa13.08□□□□□ -0.32
CXCL12-202ENST00000374426 A0A0A6YYC8 382 aaPredicted RBP13.07□□□□□ -0.32
CXCL12-202ENST00000374426 OR5H15A6NDH6 313 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 I3L1I5 382 aaPredicted RBP13.07□□□□□ -0.32
CXCL12-202ENST00000374426 CCL21O00585 134 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 P2RX6O15547 441 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 PRAMEF2O60811 474 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 WISP2O76076 250 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 CRYABP02511 175 aaKnown RBP13.07□□□□□ -0.32
CXCL12-202ENST00000374426 ESR1P03372 595 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 ANXA5P08758 320 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 EZRP15311 586 aaKnown RBP13.07□□□□□ -0.32
CXCL12-202ENST00000374426 CA7P43166 264 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 NPY2RP49146 381 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 ADARP55265 1226 aaKnown RBP13.07□□□□□ -0.32
CXCL12-202ENST00000374426 MAT1AQ00266 395 aaKnown RBP13.07□□□□□ -0.32
CXCL12-202ENST00000374426 PRDX1Q06830 199 aaKnown RBP13.07□□□□□ -0.32
CXCL12-202ENST00000374426 TSTA3Q13630 321 aaPredicted RBP13.07□□□□□ -0.32
CXCL12-202ENST00000374426 ARHGAP19Q14CB8 494 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 KLHL38Q2WGJ6 581 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 ACSBG2Q5FVE4 666 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 ABHD17BQ5VST6 288 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 ICE2Q659A1 982 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 MRNIPQ6NTE8 343 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 BNC2Q6ZN30 1099 aaPredicted RBP13.07□□□□□ -0.32
CXCL12-202ENST00000374426 NEK10Q6ZWH5 1172 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 MRGPRGQ86SM5 289 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 ZNF808Q8N4W9 903 aaPredicted RBP13.07□□□□□ -0.32
CXCL12-202ENST00000374426 DNAJB8Q8NHS0 232 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 PKP4Q99569 1192 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 KIFC1Q9BW19 673 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 RUBCNLQ9H714 662 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 BFARQ9NZS9 450 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 SUCOQ9UBS9 1254 aaKnown RBP13.07□□□□□ -0.32
CXCL12-202ENST00000374426 SEC14L3Q9UDX4 400 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 PCYOX1Q9UHG3 505 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 CRYL1Q9Y2S2 319 aa13.07□□□□□ -0.32
CXCL12-202ENST00000374426 E7ENX8 843 aa13.06□□□□□ -0.32
CXCL12-202ENST00000374426 H3BMM5 538 aa13.06□□□□□ -0.32
CXCL12-202ENST00000374426 SLC16A8O95907 504 aa13.06□□□□□ -0.32
CXCL12-202ENST00000374426 ICAM2P13598 275 aa13.06□□□□□ -0.32
CXCL12-202ENST00000374426 PKMP14618 531 aaKnown RBP13.06□□□□□ -0.32
CXCL12-202ENST00000374426 CHRM3P20309 590 aa13.06□□□□□ -0.32
CXCL12-202ENST00000374426 MGAT1P26572 445 aa13.06□□□□□ -0.32
CXCL12-202ENST00000374426 HTR1EP28566 365 aa13.06□□□□□ -0.32
CXCL12-202ENST00000374426 PNLIPRP1P54315 467 aa13.06□□□□□ -0.32
CXCL12-202ENST00000374426 AP2B1P63010 937 aa13.06□□□□□ -0.32
CXCL12-202ENST00000374426 BASP1P80723 227 aaKnown RBP13.06□□□□□ -0.32
CXCL12-202ENST00000374426 PMP22Q01453 160 aa13.06□□□□□ -0.32
CXCL12-202ENST00000374426 TAP2Q03519 686 aa13.06□□□□□ -0.32
CXCL12-202ENST00000374426 RELAQ04206 551 aa13.06□□□□□ -0.32
CXCL12-202ENST00000374426 ZNF33BQ06732 778 aa13.06□□□□□ -0.32
CXCL12-202ENST00000374426 FAM53BQ14153 422 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 237.7 ms