RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 KLRF1Q9NZS2 232 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 UTS2RQ9UKP6 389 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 IQGAP1P46940 1657 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 KIF20BQ96Q89 1820 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 EDDM13A0A1B0GTR0 161 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 SMCO3A2RU48 225 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 A8MUA0 341 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 ARPC2O15144 300 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 SNAPC5O75971 98 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 PRKD3O94806 890 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 CFIP05156 583 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 ATP1B2P14415 290 aaPredicted RBP11.24□□□□□ -0.61
VCL-202ENST00000372755 EPCAMP16422 314 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 DGKEP52429 567 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 TUBA4AP68366 448 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 CD47Q08722 323 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 ST3GAL3Q11203 375 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 SLC10A6Q3KNW5 377 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 SCGB2B2Q4G0G5 96 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 LRRC73Q5JTD7 316 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 SPIN3Q5JUX0 258 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 TUBGCP5Q96RT8 1024 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 GLS2Q9UI32 602 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 FAM170BA6NMN3 283 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 CDC7O00311 574 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 ZNF806P0C7X5 589 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 MAPK3P27361 379 aaPredicted RBP11.24□□□□□ -0.61
VCL-202ENST00000372755 GLP1RP43220 463 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 CDKN1CP49918 316 aaPredicted RBP11.24□□□□□ -0.61
VCL-202ENST00000372755 KLF1Q13351 362 aaPredicted RBP11.24□□□□□ -0.61
VCL-202ENST00000372755 ADAM15Q13444 863 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 CYP1B1Q16678 543 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 KCTD19Q17RG1 926 aaPredicted RBP11.24□□□□□ -0.61
VCL-202ENST00000372755 ADGRF1Q5T601 910 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 CGREF1Q99674 301 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 ABCD2Q9UBJ2 740 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 C19orf25Q9UFG5 118 aaPredicted RBP11.24□□□□□ -0.61
VCL-202ENST00000372755 FOXO6A8MYZ6 492 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 TOR1BO14657 336 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 SCGB1D2O95969 90 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 ZNF30P17039 623 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 KCNJ5P48544 419 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 TPTEP56180 551 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 TUBA3CQ13748 450 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 OR2T5Q6IEZ7 315 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 OR2T29Q8NH02 315 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 HMGB4Q8WW32 186 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 A0A0G2JN53 185 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 HLA-DQB2P05538 268 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 BCHEP06276 602 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 KLK1P06870 262 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 DNAJB1P25685 340 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 BMP8BP34820 402 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 CHRNA4P43681 627 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 PON3Q15166 354 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 GDF6Q6KF10 455 aaPredicted RBP11.24□□□□□ -0.61
VCL-202ENST00000372755 BMP8AQ7Z5Y6 402 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 LNX2Q8N448 690 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 STON2Q8WXE9 905 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 CDK15Q96Q40 435 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 TMEM175Q9BSA9 504 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 FZD8Q9H461 694 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 SEC61A2Q9H9S3 476 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 MTMR10Q9NXD2 777 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 A0A0J9YVX5 310 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 CPED1A4D0V7 1026 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 BPNT1O95861 308 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 HLA-DPB1P04440 258 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 TAS2R43P59537 309 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 ASB18Q6ZVZ8 466 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 THOC6Q86W42 341 aaKnown RBP11.23□□□□□ -0.61
VCL-202ENST00000372755 C1orf52Q8N6N3 182 aaKnown RBP11.23□□□□□ -0.61
VCL-202ENST00000372755 NUP50Q9UKX7 468 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 PEX12O00623 359 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 WNT7AO00755 349 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 FAM163BP0C2L3 166 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 ARL9Q6T311 187 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 JAGN1Q8N5M9 183 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 PLEKHA6Q9Y2H5 1048 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 HTR3EA5X5Y0 456 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 GLTPD2A6NH11 291 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 DISC1C4P0D8 188 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 NIPSNAP2O75323 286 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 KDM4BO94953 1096 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 DHPSP49366 369 aaPredicted RBP11.23□□□□□ -0.61
VCL-202ENST00000372755 CAPZA1P52907 286 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 RPL26P61254 145 aaKnown RBP11.23□□□□□ -0.61
VCL-202ENST00000372755 TUBA3EQ6PEY2 450 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 TRMT10BQ6PF06 316 aaKnown RBP11.23□□□□□ -0.61
VCL-202ENST00000372755 WASF2Q9Y6W5 498 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 A0A0G2JPF8 293 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 A0A1W2PRU2 124 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 SOWAHBA6NEL2 793 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 HNRNPCL3B7ZW38 293 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 AGPSO00116 658 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 RPP14O95059 124 aaKnown RBP11.23□□□□□ -0.61
VCL-202ENST00000372755 INHAP05111 366 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 HNRNPCL4P0DMR1 293 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 SLURP2P0DP57 97 aa11.23□□□□□ -0.61
VCL-202ENST00000372755 GP1BBP13224 206 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms