RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 HOXD1Q9GZZ0 328 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 SLC32A1Q9H598 525 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 RDH14Q9HBH5 336 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 ASNA1O43681 348 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 BPIP17213 487 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 CASP3P42574 277 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 RPIAP49247 311 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 TBCEQ15813 527 aaPredicted RBP15.87■□□□□ 0.13
SDC4-201ENST00000372733 IQCCQ4KMZ1 466 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 RTP2Q5QGT7 225 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 USP43Q70EL4 1123 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 CCDC103Q8IW40 242 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 PARP16Q8N5Y8 322 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 CAPSLQ8WWF8 208 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 FCGR1BQ92637 280 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 BHMTQ93088 406 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 CMTM7Q96FZ5 175 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 HRASLS5Q96KN8 279 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 HHIPQ96QV1 700 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 OR51E2Q9H255 320 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 QPCTLQ9NXS2 382 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 PSORS1C1Q9UIG5 152 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 SNX6Q9UNH7 406 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 TESMINQ9Y4I5 508 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 GLYATL1P3A0A0U1RQE8 302 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 MAGEB17A8MXT2 336 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 PRAMEF4O60810 478 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 GJA8P48165 433 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 CRYBA2P53672 197 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 WNT3P56703 355 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 IFITM2Q01629 132 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 ELP6Q0PNE2 266 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 PRAMEF9Q5VWM5 478 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 NOXRED1Q6NXP6 359 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 MACC1Q6ZN28 852 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 SPATC1Q76KD6 591 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 SLC46A3Q7Z3Q1 461 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 Q96MT0 163 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 GABARAPL3Q9BY60 117 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 RAD18Q9NS91 495 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 TMEM184CQ9NVA4 438 aa15.87■□□□□ 0.13
SDC4-201ENST00000372733 TRBV5-4A0A0C4DH59 114 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 E9PQ18 207 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 M0R129 80 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 YY2O15391 372 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 AMD1P17707 334 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 MAPK1P28482 360 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 RRM2P31350 389 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 BMPR1AP36894 532 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 GATMP50440 423 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 MTAPQ13126 283 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 SF1Q15637 639 aaKnown RBP15.86■□□□□ 0.13
SDC4-201ENST00000372733 NEK5Q6P3R8 708 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 TUBA3EQ6PEY2 450 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 SLC24A5Q71RS6 500 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 FAM124AQ86V42 546 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 SYT12Q8IV01 421 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 PGBD3Q8N328 593 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 DNAJC22Q8N4W6 341 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 SKA2Q8WVK7 121 aaPredicted RBP15.86■□□□□ 0.13
SDC4-201ENST00000372733 C7orf34Q96L11 122 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 TTPALQ9BTX7 342 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 GPR83Q9NYM4 423 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 TLL1O43897 1013 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 SSX4O60224 188 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 PTTG1O95997 202 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 DNTTP04053 509 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 GPX2P18283 190 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 ITPKAP23677 461 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 TRPC1P48995 793 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 CRISP3P54108 245 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 CYP4F2P78329 520 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 TRIM71Q2Q1W2 868 aaKnown RBP15.86■□□□□ 0.13
SDC4-201ENST00000372733 INO80DQ53TQ3 878 aaPredicted RBP15.86■□□□□ 0.13
SDC4-201ENST00000372733 PRSS55Q6UWB4 352 aaPredicted RBP15.86■□□□□ 0.13
SDC4-201ENST00000372733 GPR155Q7Z3F1 870 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 METTL4Q8N3J2 472 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 AMER2Q8N7J2 671 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 CELF2-AS1Q8N7Q2 184 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 ELMO1Q92556 727 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 GGHQ92820 318 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 MAL2Q969L2 176 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 CLSTN3Q9BQT9 956 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 RUBCNLQ9H714 662 aa15.86■□□□□ 0.13
SDC4-201ENST00000372733 NT5C1B-RDH14C9J2C7 533 aa15.85■□□□□ 0.13
SDC4-201ENST00000372733 SCN2BO60939 215 aa15.85■□□□□ 0.13
SDC4-201ENST00000372733 STSP08842 583 aa15.85■□□□□ 0.13
SDC4-201ENST00000372733 CYBAP13498 195 aa15.85■□□□□ 0.13
SDC4-201ENST00000372733 COX7A2P14406 83 aa15.85■□□□□ 0.13
SDC4-201ENST00000372733 TNFRSF1BP20333 461 aa15.85■□□□□ 0.13
SDC4-201ENST00000372733 IDH2P48735 452 aaKnown RBP15.85■□□□□ 0.13
SDC4-201ENST00000372733 ADGRF1Q5T601 910 aa15.85■□□□□ 0.13
SDC4-201ENST00000372733 METTL2BQ6P1Q9 378 aaKnown RBP15.85■□□□□ 0.13
SDC4-201ENST00000372733 PNCKQ6P2M8 343 aa15.85■□□□□ 0.13
SDC4-201ENST00000372733 ERICH5Q6P6B1 374 aa15.85■□□□□ 0.13
SDC4-201ENST00000372733 UBE2R2Q712K3 238 aaPredicted RBP15.85■□□□□ 0.13
SDC4-201ENST00000372733 TSPAN33Q86UF1 283 aa15.85■□□□□ 0.13
SDC4-201ENST00000372733 FAM9CQ8IZT9 166 aa15.85■□□□□ 0.13
SDC4-201ENST00000372733 NXPE1Q8N323 547 aa15.85■□□□□ 0.13
SDC4-201ENST00000372733 ZNF675Q8TD23 568 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms