RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ALDH4A1P30038 563 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 SLC1A2P43004 574 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 SRSF11Q05519 484 aaKnown RBP12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 SNAPC1Q16533 368 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 GKN2Q86XP6 184 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 DCAF4L2Q8NA75 395 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 ANKLE1Q8NAG6 615 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 AVL9Q8NBF6 648 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 CCM2Q9BSQ5 444 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 COPS7AQ9UBW8 275 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 NEMP2A6NFY4 417 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 KLF8O95600 359 aaPredicted RBP12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 RLN1P04808 185 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 SLC2A5P22732 501 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 S100GP29377 79 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 MASP1P48740 699 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 RBM48Q5RL73 367 aaKnown RBP12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 ANO7Q6IWH7 933 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 DEFB119Q8N690 84 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 NECTIN4Q96NY8 510 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 FCRL4Q96PJ5 515 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 SAGE1Q9NXZ1 904 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 ADAMTS5Q9UNA0 930 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 CRYZL1O95825 349 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 TFPIP10646 304 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 SLC18A1P54219 525 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 TPTEP56180 551 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 PTGES3Q15185 160 aaKnown RBP12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 C3orf33Q6P1S2 294 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 C3orf58Q8NDZ4 430 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 IPCEF1Q8WWN9 437 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 RBM18Q96H35 190 aaKnown RBP12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 YTHDF1Q9BYJ9 559 aaKnown RBP12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 SLC2A4RGQ9NR83 387 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 MT-ND1P03886 318 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 RAP2AP10114 183 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 AQP1P29972 269 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 AP3S2P59780 193 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 LYSMD3Q7Z3D4 306 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 NUSAP1Q9BXS6 441 aaKnown RBP12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 NKIRAS2Q9NYR9 191 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 CNTN6Q9UQ52 1028 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 PADI2Q9Y2J8 665 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 ORC5O43913 435 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 MLLT3P42568 568 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 CTSOP43234 321 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 ARRB1P49407 418 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 MERTKQ12866 999 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 E2F2Q14209 437 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 VMACQ2NL98 169 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 UAP1L1Q3KQV9 507 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 PLEKHG4Q58EX7 1191 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 PACRGLQ8N7B6 248 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 MS4A4AQ96JQ5 239 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 DNAJB9Q9UBS3 223 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 SLC7A8Q9UHI5 535 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 OAS3Q9Y6K5 1087 aaKnown RBP12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 SLC22A1O15245 554 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 TBX10O75333 385 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 OR5K1Q8NHB7 308 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 PTPN18Q99952 460 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 ARPC5LQ9BPX5 153 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 GFOD1Q9NXC2 390 aa12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 ZNF230Q9UIE0 474 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF1-201ENST00000372189 UGT1A9O60656 530 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 NCK1P16333 377 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 UGT1A6P19224 532 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 UGT1A1P22309 533 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 UGT1A4P22310 534 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 UGT1A3P35503 534 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 WDR4P57081 412 aaKnown RBP12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 ZBED5Q49AG3 693 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 BEND5Q7L4P6 421 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 IFNLR1Q8IU57 520 aaPredicted RBP12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 MCEMP1Q8IX19 187 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 DHRS1Q96LJ7 313 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 CNPPD1Q9BV87 410 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 UGT1A7Q9HAW7 530 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 UGT1A10Q9HAW8 530 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 UGT1A8Q9HAW9 530 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 SPHK2Q9NRA0 654 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 MTRRQ9UBK8 725 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 UBR2Q8IWV8 1755 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 DNAJC25-GNG10A0A024R161 153 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 CXCR6O00574 342 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 HLA-EP13747 358 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 NADK2Q4G0N4 442 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 OGFOD2Q6N063 350 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 FBXO15Q8NCQ5 510 aaPredicted RBP12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 FAM46DQ8NEK8 389 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 CMASQ8NFW8 434 aaPredicted RBP12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 LMX1AQ8TE12 382 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 SEC14L3Q9UDX4 400 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 FAM172BPA6NC97 362 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 AQP12BA6NM10 295 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 IFNW1P05000 195 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 ZNF730Q6ZMV8 503 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 LAPTM4BQ86VI4 370 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms