RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 OR8D1Q8WZ84 308 aa15.5■□□□□ 0.07
COL17A1-202ENST00000369733 SLC29A1Q99808 456 aa15.5■□□□□ 0.07
COL17A1-202ENST00000369733 PTPN18Q99952 460 aa15.5■□□□□ 0.07
COL17A1-202ENST00000369733 RNF39Q9H2S5 420 aa15.5■□□□□ 0.07
COL17A1-202ENST00000369733 FBXW2Q9UKT8 454 aa15.5■□□□□ 0.07
COL17A1-202ENST00000369733 MYH3P11055 1940 aa15.5■□□□□ 0.07
COL17A1-202ENST00000369733 SETD1AO15047 1707 aaKnown RBP15.5■□□□□ 0.07
COL17A1-202ENST00000369733 SYN3O14994 580 aa15.5■□□□□ 0.07
COL17A1-202ENST00000369733 HSD17B1P14061 328 aa15.5■□□□□ 0.07
COL17A1-202ENST00000369733 RPS24P62847 133 aaKnown RBP15.5■□□□□ 0.07
COL17A1-202ENST00000369733 HNRNPA0Q13151 305 aaKnown RBP15.5■□□□□ 0.07
COL17A1-202ENST00000369733 LYSMD3Q7Z3D4 306 aa15.5■□□□□ 0.07
COL17A1-202ENST00000369733 ABHD11Q8NFV4 315 aa15.5■□□□□ 0.07
COL17A1-202ENST00000369733 ZNF382Q96SR6 550 aa15.5■□□□□ 0.07
COL17A1-202ENST00000369733 BCL2L14Q9BZR8 327 aa15.5■□□□□ 0.07
COL17A1-202ENST00000369733 DNAJC27Q9NZQ0 273 aa15.5■□□□□ 0.07
COL17A1-202ENST00000369733 PDCD5O14737 125 aa15.5■□□□□ 0.07
COL17A1-202ENST00000369733 POP4O95707 220 aaKnown RBP15.5■□□□□ 0.07
COL17A1-202ENST00000369733 ZNF24P17028 368 aa15.5■□□□□ 0.07
COL17A1-202ENST00000369733 NKX2-5P52952 324 aaPredicted RBP15.5■□□□□ 0.07
COL17A1-202ENST00000369733 SPIN4Q56A73 249 aa15.5■□□□□ 0.07
COL17A1-202ENST00000369733 FAM46DQ8NEK8 389 aa15.5■□□□□ 0.07
COL17A1-202ENST00000369733 ZMIZ2Q8NF64 920 aa15.5■□□□□ 0.07
COL17A1-202ENST00000369733 C12orf42Q96LP6 360 aa15.5■□□□□ 0.07
COL17A1-202ENST00000369733 SMOC2Q9H3U7 446 aa15.5■□□□□ 0.07
COL17A1-202ENST00000369733 SEC14L4Q9UDX3 406 aa15.5■□□□□ 0.07
COL17A1-202ENST00000369733 TLX2O43763 284 aaPredicted RBP15.49■□□□□ 0.07
COL17A1-202ENST00000369733 SOX14O95416 240 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 MLLT6P55198 1093 aaPredicted RBP15.49■□□□□ 0.07
COL17A1-202ENST00000369733 SLC13A2Q13183 592 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 RAB6CQ53S08 254 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 ATG9BQ674R7 924 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 SLC24A5Q71RS6 500 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 HAVCR1Q96D42 359 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 RAB6CQ9H0N0 254 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 SACM1LQ9NTJ5 587 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 ABCG2Q9UNQ0 655 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 SLC27A6Q9Y2P4 619 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 DCLK1O15075 740 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 CAPN15O75808 1086 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 HLA-DPB1P04440 258 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 SRPRAP08240 638 aaKnown RBP15.49■□□□□ 0.07
COL17A1-202ENST00000369733 SMSP52788 366 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 AP2S1P53680 142 aaPredicted RBP15.49■□□□□ 0.07
COL17A1-202ENST00000369733 TXNL4AP83876 142 aaKnown RBP15.49■□□□□ 0.07
COL17A1-202ENST00000369733 XKRXQ6PP77 449 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 RTP4Q96DX8 246 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 ZNF354BQ96LW1 612 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 SORT1Q99523 831 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 TTYH2Q9BSA4 534 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 ARMC1Q9NVT9 282 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 PAQR5Q9NXK6 330 aaPredicted RBP15.49■□□□□ 0.07
COL17A1-202ENST00000369733 TAS2R9Q9NYW1 312 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 PCDHGA4Q9Y5G9 962 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 MED1Q15648 1581 aaPredicted RBP15.49■□□□□ 0.07
COL17A1-202ENST00000369733 ZNF701M0R085 212 aaPredicted RBP15.49■□□□□ 0.07
COL17A1-202ENST00000369733 USP2O75604 605 aaPredicted RBP15.49■□□□□ 0.07
COL17A1-202ENST00000369733 ZNF598Q86UK7 904 aaKnown RBP15.49■□□□□ 0.07
COL17A1-202ENST00000369733 ING5Q8WYH8 240 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 CMTM7Q96FZ5 175 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 SMOQ99835 787 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 SMURF1Q9HCE7 757 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 FARSBQ9NSD9 589 aaKnown RBP15.49■□□□□ 0.07
COL17A1-202ENST00000369733 HCN4Q9Y3Q4 1203 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 MCIDASD6RGH6 385 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 NME4O00746 187 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 GRID2O43424 1007 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 ALPPP05187 535 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 SPATA31D3P0C874 917 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 GSTM3P21266 225 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 SPATA31D4Q6ZUB0 917 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 ZNF248Q8NDW4 579 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 SRFBP1Q8NEF9 429 aaKnown RBP15.49■□□□□ 0.07
COL17A1-202ENST00000369733 OR10G6Q8NH81 332 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 STRA6Q9BX79 667 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 ZDHHC3Q9NYG2 299 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 RDH8Q9NYR8 311 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 MARK1Q9P0L2 795 aa15.49■□□□□ 0.07
COL17A1-202ENST00000369733 SLC38A8A6NNN8 435 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 BCHEP06276 602 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 RPP38P78345 283 aaKnown RBP15.48■□□□□ 0.07
COL17A1-202ENST00000369733 NCSTNQ92542 709 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 CAMK1GQ96NX5 476 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 BEX2Q9BXY8 128 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 ANXA2P2A6NMY6 339 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 SCN2BO60939 215 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 TGFB1P01137 390 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 ANXA2P07355 339 aaKnown RBP15.48■□□□□ 0.07
COL17A1-202ENST00000369733 IL7P13232 177 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 PIK3CBP42338 1070 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 AVPR1BP47901 424 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 PPP5CP53041 499 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 RPL10LQ96L21 214 aaKnown RBP15.48■□□□□ 0.07
COL17A1-202ENST00000369733 HEPHQ9BQS7 1158 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 HTATIP2Q9BUP3 242 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 CD244Q9BZW8 370 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 TCF7L1Q9HCS4 588 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 ZNF69Q9UC07 566 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 OPRL1P41146 370 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 PTGR1Q14914 329 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms