RNA–Protein interactions for RNA: ENST00000369459.6

BRCC3-203, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5 BASIC

Gene BRCC3, Length 2,641 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-203ENST00000369459 VAT1Q99536 393 aa7.29□□□□□ -1.24
BRCC3-203ENST00000369459 RAB6CQ9H0N0 254 aa7.29□□□□□ -1.24
BRCC3-203ENST00000369459 TMEM184CQ9NVA4 438 aa7.29□□□□□ -1.24
BRCC3-203ENST00000369459 OR12D3Q9UGF7 316 aa7.29□□□□□ -1.24
BRCC3-203ENST00000369459 DAPK2Q9UIK4 370 aa7.29□□□□□ -1.24
BRCC3-203ENST00000369459 DNPEPQ9ULA0 475 aa7.29□□□□□ -1.24
BRCC3-203ENST00000369459 CAMK2AQ9UQM7 478 aa7.29□□□□□ -1.24
BRCC3-203ENST00000369459 WASF2Q9Y6W5 498 aa7.29□□□□□ -1.24
BRCC3-203ENST00000369459 EFCAB7A8K855 629 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 C2CD2LO14523 706 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 DAPK3O43293 454 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 PAGE1O75459 146 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 MED6O75586 246 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 SCO1O75880 301 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 TGM6O95932 706 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 ACADMP11310 421 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 HNF1AP20823 631 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 COL9A1P20849 921 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 F8A1P23610 371 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 IVDP26440 423 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 MSX1P28360 303 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 MAGEA6P43360 314 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 SLC1A6P48664 564 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 ERVK-8P63133 956 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 SLC7A9P82251 487 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 GRM7Q14831 915 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 GRIN2CQ14957 1233 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 PON3Q15166 354 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 SLX4IPQ5VYV7 408 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 GSTA5Q7RTV2 222 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.28□□□□□ -1.24
BRCC3-203ENST00000369459 ZNF551Q7Z340 670 aaPredicted RBP7.28□□□□□ -1.24
BRCC3-203ENST00000369459 KBTBD2Q8IY47 623 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 ZNF683Q8IZ20 524 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 BEND7Q8N7W2 519 aaPredicted RBP7.28□□□□□ -1.24
BRCC3-203ENST00000369459 ATG16L2Q8NAA4 619 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 ZNF596Q8TC21 504 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 PHF21BQ96EK2 531 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 PTCD3Q96EY7 689 aaKnown RBP7.28□□□□□ -1.24
BRCC3-203ENST00000369459 MARS2Q96GW9 593 aaKnown RBP7.28□□□□□ -1.24
BRCC3-203ENST00000369459 ZNF512Q96ME7 567 aaPredicted RBP7.28□□□□□ -1.24
BRCC3-203ENST00000369459 OLFM1Q99784 485 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 PRMT1Q99873 361 aaKnown RBP7.28□□□□□ -1.24
BRCC3-203ENST00000369459 THUMPD3Q9BV44 507 aaKnown RBP7.28□□□□□ -1.24
BRCC3-203ENST00000369459 LRRC3Q9BY71 257 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 ASB8Q9H765 288 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 SEPSECSQ9HD40 501 aaKnown RBP7.28□□□□□ -1.24
BRCC3-203ENST00000369459 FAM120CQ9NX05 1096 aaKnown RBP7.28□□□□□ -1.24
BRCC3-203ENST00000369459 PAK5Q9P286 719 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 MSRAQ9UJ68 235 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 SCML1Q9UN30 329 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 SHOC2Q9UQ13 582 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 CLCA2Q9UQC9 943 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 PSAT1Q9Y617 370 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 CSNK1G3Q9Y6M4 447 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 NOTCH4Q99466 2003 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 RNF103-CHMP3A0A140T963 221 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 C5orf60A6NFR6 353 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 URADA6NGE7 173 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 RNF103O00237 685 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 ARNTLO00327 626 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 PLK4O00444 970 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 APOA1P02647 267 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 GOT1P17174 413 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 DDCP20711 480 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 CRHR1P34998 444 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 RPL35P42766 123 aaKnown RBP7.28□□□□□ -1.24
BRCC3-203ENST00000369459 SOX9P48436 509 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 NDST2P52849 883 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 RABGGTBP53611 331 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 ERVFC1P60507 584 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 VAMP2P63027 116 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 TNK2Q07912 1038 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 GALNT2Q10471 571 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 MMRN1Q13201 1228 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 THOC5Q13769 683 aaKnown RBP7.28□□□□□ -1.24
BRCC3-203ENST00000369459 C16orf72Q14CZ0 275 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 SHHQ15465 462 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 EIF2S3LQ2VIR3 472 aaKnown RBP7.28□□□□□ -1.24
BRCC3-203ENST00000369459 MEDAGQ5VYS4 303 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 LYPD8Q6UX82 237 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 SYNPOQ8N3V7 929 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 OR8K5Q8NH50 307 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 LRRC20Q8TCA0 184 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 PNPT1Q8TCS8 783 aaKnown RBP7.28□□□□□ -1.24
BRCC3-203ENST00000369459 WFIKKN2Q8TEU8 576 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 EXOSC8Q96B26 276 aaKnown RBP7.28□□□□□ -1.24
BRCC3-203ENST00000369459 GCNAQ96QF7 691 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 CYP2S1Q96SQ9 504 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 KLF16Q9BXK1 252 aaPredicted RBP7.28□□□□□ -1.24
BRCC3-203ENST00000369459 POLDIP3Q9BY77 421 aaKnown RBP7.28□□□□□ -1.24
BRCC3-203ENST00000369459 SEMA4CQ9C0C4 833 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 ALX4Q9H161 411 aaPredicted RBP7.28□□□□□ -1.24
BRCC3-203ENST00000369459 IL21Q9HBE4 155 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 IFT46Q9NQC8 304 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 DZANK1Q9NVP4 752 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 TMEM248Q9NWD8 314 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 GPATCH2LQ9NWQ4 482 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 GDE1Q9NZC3 331 aa7.28□□□□□ -1.24
BRCC3-203ENST00000369459 NEU3Q9UQ49 428 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms