RNA–Protein interactions for RNA: ENST00000366170.6

VSTM1-202, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene VSTM1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-202ENST00000366170 SNX6Q9UNH7 406 aa12.49□□□□□ -0.41
VSTM1-202ENST00000366170 SH2B3Q9UQQ2 575 aa12.49□□□□□ -0.41
VSTM1-202ENST00000366170 TIMM22Q9Y584 194 aa12.49□□□□□ -0.41
VSTM1-202ENST00000366170 A0A1B0GTL3 188 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 FFAR3O14843 346 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 GPR42O15529 346 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 MAP3K7O43318 606 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 TNFSF14O43557 240 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 PRAMEF4O60810 478 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 SNRNP200O75643 2136 aaKnown RBP12.48□□□□□ -0.41
VSTM1-202ENST00000366170 CHEK2O96017 543 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 KRT6AP02538 564 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 KRT6BP04259 564 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 RPLP0P05388 317 aaKnown RBP12.48□□□□□ -0.41
VSTM1-202ENST00000366170 UROSP10746 265 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 JUPP14923 745 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 ACP1P24666 158 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 KRT6CP48668 564 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 CSNK1G2P78368 415 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 CBX1P83916 185 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 SQSTM1Q13501 440 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 SLBPQ14493 270 aaKnown RBP eCLIP12.48□□□□□ -0.41
VSTM1-202ENST00000366170 ZRSR2Q15696 482 aaKnown RBP12.48□□□□□ -0.41
VSTM1-202ENST00000366170 SGO1Q5FBB7 561 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 PRAMEF9Q5VWM5 478 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 GRHL2Q6ISB3 625 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 MED27Q6P2C8 311 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 WDR74Q6RFH5 385 aaPredicted RBP12.48□□□□□ -0.41
VSTM1-202ENST00000366170 OR4K1Q8NGD4 311 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 MTFMTQ96DP5 389 aaKnown RBP12.48□□□□□ -0.41
VSTM1-202ENST00000366170 WDR34Q96EX3 536 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 KCNA7Q96RP8 456 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 CD180Q99467 661 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 MAP3K3Q99759 626 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 DPYSL5Q9BPU6 564 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 NSRP1Q9H0G5 558 aaKnown RBP12.48□□□□□ -0.41
VSTM1-202ENST00000366170 KLHL25Q9H0H3 589 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 SEMA6CQ9H3T2 930 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 SLC6A20Q9NP91 592 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 FGFR1OP2Q9NVK5 253 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 VTI1BQ9UEU0 232 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 MARCOQ9UEW3 520 aaPredicted RBP12.48□□□□□ -0.41
VSTM1-202ENST00000366170 KLHL3Q9UH77 587 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 HAO1Q9UJM8 370 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 ZNF225Q9UK10 706 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 KLHL20Q9Y2M5 609 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 PCDHGA11Q9Y5H2 935 aa12.48□□□□□ -0.41
VSTM1-202ENST00000366170 EP300Q09472 2414 aaPredicted RBP12.47□□□□□ -0.41
VSTM1-202ENST00000366170 ANKDD1BA6NHY2 528 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 SLC9B1P1A6NJY1 282 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 A8MU76 341 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 OR1F1O43749 312 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 KIF1CO43896 1103 aaKnown RBP12.47□□□□□ -0.41
VSTM1-202ENST00000366170 ULK1O75385 1050 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 RASSF9O75901 435 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 TGDSO95455 350 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 CPNE6O95741 557 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 GP1BAP07359 652 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 TROVE2P10155 538 aaKnown RBP eCLIP12.47□□□□□ -0.41
VSTM1-202ENST00000366170 PCNAP12004 261 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 PVRP15151 417 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 MAGP20916 626 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 ARL4DP49703 201 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 HK2P52789 917 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 FOXA1P55317 472 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 PPP1CAP62136 330 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 MEF2AQ02078 507 aaPredicted RBP12.47□□□□□ -0.41
VSTM1-202ENST00000366170 IFT88Q13099 833 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 GGTA1PQ4G0N0 100 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 CCDC157Q569K6 752 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 SNAP47Q5SQN1 464 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 CACHD1Q5VU97 1274 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 CLEC6AQ6EIG7 209 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 TMEM71Q6P5X7 295 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 TMIGD1Q6UXZ0 262 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 FAM129CQ86XR2 697 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 CHCHD4Q8N4Q1 142 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 REPS1Q96D71 796 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 PPM1MQ96MI6 270 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 GFM1Q96RP9 751 aaKnown RBP12.47□□□□□ -0.41
VSTM1-202ENST00000366170 PLCD4Q9BRC7 762 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 TRIM55Q9BYV6 548 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 SLC29A3Q9BZD2 475 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 FAM107BQ9H098 131 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 EPN3Q9H201 632 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 ELOVL6Q9H5J4 265 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 NT5DC2Q9H857 520 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 TNFRSF12AQ9NP84 129 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 GEMIN8Q9NWZ8 242 aaKnown RBP12.47□□□□□ -0.41
VSTM1-202ENST00000366170 ANKMY1Q9P2S6 941 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 ATXN7L1Q9ULK2 861 aaPredicted RBP12.47□□□□□ -0.41
VSTM1-202ENST00000366170 PCNX2A6NKB5 2137 aa12.47□□□□□ -0.41
VSTM1-202ENST00000366170 IGKV1-8A0A0C4DH67 115 aa12.46□□□□□ -0.41
VSTM1-202ENST00000366170 A0A1W2PQM1 296 aa12.46□□□□□ -0.41
VSTM1-202ENST00000366170 TRBC2A0A5B9 178 aa12.46□□□□□ -0.41
VSTM1-202ENST00000366170 FEZF1A0PJY2 475 aa12.46□□□□□ -0.41
VSTM1-202ENST00000366170 TLCD2A6NGC4 264 aa12.46□□□□□ -0.41
VSTM1-202ENST00000366170 SRRM3A6NNA2 597 aaPredicted RBP12.46□□□□□ -0.41
VSTM1-202ENST00000366170 TMEM233B4DJY2 109 aa12.46□□□□□ -0.41
VSTM1-202ENST00000366170 MANBAO00462 879 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms