RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 TDRD1Q9BXT4 1180 aaKnown RBP3.74□□□□□ -1.81
RNU4-28P-201ENST00000364739 NYXQ9GZU5 481 aa3.74□□□□□ -1.81
RNU4-28P-201ENST00000364739 PIH1D3Q9NQM4 214 aaKnown RBP3.74□□□□□ -1.81
RNU4-28P-201ENST00000364739 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.74□□□□□ -1.81
RNU4-28P-201ENST00000364739 PASKQ96RG2 1323 aa3.73□□□□□ -1.81
RNU4-28P-201ENST00000364739 URADA6NGE7 173 aa3.73□□□□□ -1.81
RNU4-28P-201ENST00000364739 GP1BBP13224 206 aa3.73□□□□□ -1.81
RNU4-28P-201ENST00000364739 TSFMP43897 325 aaKnown RBP3.73□□□□□ -1.81
RNU4-28P-201ENST00000364739 CAPZA2P47755 286 aa3.73□□□□□ -1.81
RNU4-28P-201ENST00000364739 ASCL1P50553 236 aa3.73□□□□□ -1.81
RNU4-28P-201ENST00000364739 CSE1LP55060 971 aaKnown RBP3.73□□□□□ -1.81
RNU4-28P-201ENST00000364739 TMEM50BP56557 158 aa3.73□□□□□ -1.81
RNU4-28P-201ENST00000364739 RBPJQ06330 500 aa3.73□□□□□ -1.81
RNU4-28P-201ENST00000364739 RALBP1Q15311 655 aa3.73□□□□□ -1.81
RNU4-28P-201ENST00000364739 C9orf152Q5JTZ5 239 aa3.73□□□□□ -1.81
RNU4-28P-201ENST00000364739 WDR78Q5VTH9 848 aa3.73□□□□□ -1.81
RNU4-28P-201ENST00000364739 TTC30BQ8N4P2 665 aa3.73□□□□□ -1.81
RNU4-28P-201ENST00000364739 ROBO4Q8WZ75 1007 aa3.73□□□□□ -1.81
RNU4-28P-201ENST00000364739 ATXN7L3BQ96GX2 97 aa3.73□□□□□ -1.81
RNU4-28P-201ENST00000364739 PANK2Q9BZ23 570 aa3.73□□□□□ -1.81
RNU4-28P-201ENST00000364739 MED20Q9H944 212 aa3.73□□□□□ -1.81
RNU4-28P-201ENST00000364739 B3GAT2Q9NPZ5 323 aa3.73□□□□□ -1.81
RNU4-28P-201ENST00000364739 MORF4L1Q9UBU8 362 aa3.73□□□□□ -1.81
RNU4-28P-201ENST00000364739 CSAG2Q9Y5P2 127 aa3.73□□□□□ -1.81
RNU4-28P-201ENST00000364739 IGHV3OR16-10A0A075B7F0 116 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 SNX3O60493 162 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 ATP6AP2O75787 350 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 BAG3O95817 575 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 SAGP10523 405 aaPredicted RBP3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 CPT2P23786 658 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 PDHA2P29803 388 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 HLA-FP30511 346 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 TLX1P31314 330 aaPredicted RBP3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 OR3A2P47893 321 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 SLC8A3P57103 927 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 PAX8Q06710 450 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 NPTX1Q15818 432 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 MTHFSDQ2M296 383 aaKnown RBP3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 TMEM266Q2M3C6 531 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 ERMARDQ5T6L9 678 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 KRT39Q6A163 491 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 OR4C11Q6IEV9 310 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 CTR9Q6PD62 1173 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 FRRS1Q6ZNA5 592 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 AMER3Q8N944 861 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 LRTM2Q8N967 370 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 NOA1Q8NC60 698 aaKnown RBP3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 METTL21AQ8WXB1 218 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 PIK3R3Q92569 461 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 KLHL5Q96PQ7 755 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 MAP3K3Q99759 626 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 SLF1Q9BQI6 1058 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 AGRNO00468 2067 aa3.72□□□□□ -1.81
RNU4-28P-201ENST00000364739 NPIPB9F8W1W9 429 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 H0YAE9 185 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 CLDN4O14493 209 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 RPS6KA5O75582 802 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 EPCAMP16422 314 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 ACHEP22303 614 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 ELAVL4P26378 380 aaKnown RBP3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 ALDH3A2P51648 485 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 PPP5CP53041 499 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 CLDN15P56746 228 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 CD300CQ08708 224 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 AIMP1Q12904 312 aaKnown RBP3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 TRIM29Q14134 588 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 ZNF774Q6NX45 483 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 BRINP3Q76B58 766 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 PRPF39Q86UA1 669 aaKnown RBP3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 RASGEF1AQ8N9B8 481 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 ARSGQ96EG1 525 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 ZNF558Q96NG5 402 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 PI4K2AQ9BTU6 479 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 MTMR12Q9C0I1 747 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 EGLN3Q9H6Z9 239 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 GSN-AS1Q9NRJ2 163 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 TXNDC16Q9P2K2 825 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 CROCCQ5TZA2 2017 aa3.71□□□□□ -1.82
RNU4-28P-201ENST00000364739 A0A1W2PPR1 153 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 ASB14A6NK59 587 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 SERPING1P05155 500 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 PRPF4BQ13523 1007 aaKnown RBP3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 TRA2AQ13595 282 aaKnown RBP eCLIP3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 OPCMLQ14982 345 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 TOMM20Q15388 145 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 TAB1Q15750 504 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 CRY2Q49AN0 593 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 LACTB2Q53H82 288 aaPredicted RBP3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 ARMC4Q5T2S8 1044 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 MFSD4BQ5TF39 518 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 NAA16Q6N069 864 aaPredicted RBP3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 C16orf54Q6UWD8 224 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 GDPGP1Q6ZNW5 385 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 CHMP1BQ7LBR1 199 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 TLK2Q86UE8 772 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 METTL4Q8N3J2 472 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 CHPT1Q8WUD6 406 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 RASL10AQ92737 203 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 PGAP3Q96FM1 320 aaPredicted RBP3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 NDNQ99608 321 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms